Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20arizonense_20[genbank_20GCA_5F001773325.1_202016-10- 18] 396 sequences; 33,729,052 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 114 2e-20 seq17 105 8e-18 >seq1 Length=2696425 Score = 114 bits (126), Expect = 2e-20 Identities = 113/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| |||||||| ||| ||||||||||| | | || | ||||||||| || ||||| Sbjct 2273646 ACAAGCGAAATCCGTGTGGAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTGAG 2273587 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 |||||||| || |||||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 2273586 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAA 2273527 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAA 24279 || || || || || || ||||||| Sbjct 2273526 GATACCCTCGACAGCAGCGAAGGCAA 2273501 >seq17 Length=717694 Score = 105 bits (116), Expect = 8e-18 Identities = 363/564 (64%), Gaps = 8/564 (1%) Strand=Plus/Plus Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764 |||| ||| |||| || ||||| || ||||||| || | | || | || |||||| Sbjct 378786 GCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCA 378845 Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824 ||||| || || | || ||||| | || | || || ||||| ||||| || Sbjct 378846 GTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 378905 Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884 |||||||| || || ||||| || |||| || ||| |||||| || | ||| || | | Sbjct 378906 GCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCAAGAATGGCATAC 378965 Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGT----GT 53940 |||| ||||||| || | || | | ||| ||| || | || Sbjct 378966 CAGAGCTTCTGAGCCTTAATGGTC--TTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGT 379023 Query 53941 ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 54000 | | | | || ||||| || || | |||| | | |||| || | || || Sbjct 379024 AGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCA 379081 Query 54001 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 54060 | | | ||| || |||| | ||| || || ||||| || ||||||||| |||| || Sbjct 379082 GAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAG 379141 Query 54061 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 54120 ||| || ||||| | || | | ||| || || || ||||| |||||||| Sbjct 379142 AGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTGCGGAGATCGAG 379201 Query 54121 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTT 54180 |||| | | | ||| | ||||| || |||| || |||| | | || || || || Sbjct 379202 GAACTCGAAGACATCTGCGTGCCAGGGCTCCAGATAGATGGCAAACGCACCGGGGCGCTT 379261 Query 54181 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 54240 ||| || ||||| || | ||| | || |||||||| | || | | ||| |||| ||| Sbjct 379262 GTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAAT 379321 Query 54241 ACCATTGGATGCACCATTGGTCCC 54264 ||||||||| | || ||||| || Sbjct 379322 ACCATTGGAGGAGCCGTTGGTTCC 379345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593718661078080