Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20arizonense_20[genbank_20GCA_5F001773325.1_202016-10- 18] 396 sequences; 33,729,052 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq17 141 1e-28 seq1 127 3e-24 >seq17 Length=717694 Score = 141 bits (156), Expect = 1e-28 Identities = 726/1143 (64%), Gaps = 16/1143 (1%) Strand=Plus/Plus Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 ||| |||| || ||||| || ||||||| || | | || | || || |||||||| Sbjct 378791 AGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCAGTGCA 378850 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 ||||| | ||| ||||| | || | || || ||||| ||||| || ||||| Sbjct 378851 CAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 378910 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||| || || ||||| || |||| || ||| |||| | || | ||| || | ||||| Sbjct 378911 CTTGTACAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGA- 378969 Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTTTC--GTA-TTGT-GTATA 79853 | || ||||||| || | |||| | | ||| ||| ||| || | ||| | Sbjct 378970 GCTTCTGAGCCTTAATGGT---CTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGA 379026 Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913 | | |||||||| || || | ||||| | | |||| |||| || || | Sbjct 379027 GAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAA 379084 Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973 | | ||| || || | | ||| || || ||||| || ||||||||| |||| ||||| Sbjct 379085 GAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGC 379144 Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033 || ||||| | || | | || || || || ||||| ||||||||||| Sbjct 379145 GTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTGCGGAGATCGAGGAA 379204 Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093 | | | | ||| | ||||| || |||| || ||||| | | || || || ||||| Sbjct 379205 CTCGAAGACATCTGCGTGCCAGGGCTCCAGATAGATGGCAAACGCACCGGGGCGCTTGTT 379264 Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 || ||||| || | ||| | || |||||||| | || | | ||| |||| |||||| Sbjct 379265 ACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACC 379324 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 |||||| | || ||||| || || ||| || ||||||| || || Sbjct 379325 ATTGGAGGAGCCGTTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATT 379384 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGA 80272 | ||| || || || || | || ||||| | || || || |||| || || |||| Sbjct 379385 CAAACCAATACCACCAGCGGTCTTGGAGATCATAGCACA-GGTCTTAAGAGTGTCGTAGA 379443 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332 | ||||| ||||| || || ||||| | || || || || | ||| | | Sbjct 379444 TACCCTCAATGCTGTCTGCAGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGG 379503 Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392 ||| | || || || | || || || ||||| || || | |||| |||| | | Sbjct 379504 GAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGT 379563 Query 80393 TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTA 80452 ||| ||||||||||| || || ||| || || || || || |||||||| | Sbjct 379564 GGTAGGTCTCAATAGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACACGCATCA 379623 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 || |||||| || | || | | || || || | | || || |||| Sbjct 379624 GCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCA 379683 Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572 || || ||||| || ||||||| ||||| || ||||| | ||| ||||||| | Sbjct 379684 GGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTTAA 379743 Query 80573 GTTTATCCTTATATTTGTTAACTACATCCATGGTGATACT-TGAAATAATCGGAGAATGT 80631 | | || | || |||| | | ||| ||| | | || || || |||| | | Sbjct 379744 GCTCCTCGGCGTGCTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGAGCAGGC 379802 Query 80632 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 80691 || ||||| ||||||||||||| | | | || || || ||| | ||| Sbjct 379803 TTATTGTTTTTGGGATTAACATAGTGGTAGAGGTCGGAGATGACCATGGAGAATTGCTTT 379862 Query 80692 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGA 80751 ||||| | |||||| || || || ||||| || | ||| || | ||||| || || || Sbjct 379863 TTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGTCCGGG 379922 Query 80752 TGT 80754 ||| Sbjct 379923 TGT 379925 >seq1 Length=2696425 Score = 127 bits (140), Expect = 3e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| |||||||| ||| ||||||||||| | | || ||||||||||| || ||||| Sbjct 2273646 ACAAGCGAAATCCGTGTGGAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTGAG 2273587 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 |||||||| || |||||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 2273586 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAA 2273527 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 ||| || || || || || |||||||| || Sbjct 2273526 GATACCCTCGACAGCAGCGAAGGCAACCAG 2273497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265244569440