Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20arizonense_20[genbank_20GCA_5F001773325.1_202016-10-
18] 396 sequences; 33,729,052 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq57 140 2e-28
seq9 111 1e-19
>seq57
Length=45146
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2699 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2640
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 2639 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2605
>seq9
Length=1056419
Score = 111 bits (122), Expect = 1e-19
Identities = 232/344 (67%), Gaps = 10/344 (3%)
Strand=Plus/Plus
Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258
||||| |||||||| ||| | | | || | ||||||||||| || ||||| |||||||
Sbjct 630837 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCCAAGGTCGAAGGCAAGGGCAACGGTA 630894
Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318
|||| ||||| | |||||| || ||||| ||| | ||| | || ||| | |||
Sbjct 630895 TTAAGACCGTTGTCGTCAACCTGGACTCCGTCGCCAAGTCCCTCAGCCGTCCTCCTGCCT 630954
Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378
||| | || || ||||| | |||||| || |||||| | | | | || |||
Sbjct 630955 ACCTCATCAAGTACTTCGGTTTCGAACTCGGTGCTCAGGCTAACGCCAAGCCCACCGACG 631014
Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438
| |||| ||| | ||||| || || | | ||||||| ||||||| ||||| || |
Sbjct 631015 AACGCTGGATCATCAACGGTTCCCACGATGCCCCCAAGCTTCAGGACTACCTTGATGGGT 631074
Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGT 6498
| || |||||| || || || | | ||| | ||||| || ||||| ||| |
Sbjct 631075 TCATCTCCAAGTTCGTTCTCTGCAAGAAGTGCAAGAACCCCGAAACCGA------TGTCT 631128
Query 6499 CTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGT 6542
| | |||| | | ||| ||| || |||||| || || |||
Sbjct 631129 CCATCAAGGATGAGAAGATCACTCTGGACTGCAAGGCCTGTGGT 631172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945583461076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |