Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20arizonense_20[genbank_20GCA_5F001773325.1_202016-10- 18] 396 sequences; 33,729,052 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 140 3e-28 seq12 96.9 3e-15 seq13 93.3 4e-14 >seq1 Length=2696425 Score = 140 bits (154), Expect = 3e-28 Identities = 354/531 (67%), Gaps = 33/531 (6%) Strand=Plus/Plus Query 52326 GTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCG-- 52383 || || ||| || ||| |||||| ||||||| || |||||| | ||||| | Sbjct 2273422 GTTCCCTGCATTGCCAAGAAGGCTGAGTGGGCCATCCGCTGGATCAAT---GACACTGAG 2273478 Query 52384 -CCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442 | || | || ||| |||| |||||||| |||||||| | || || || ||| Sbjct 2273479 TCGACCTTCGCTTCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGC 2273538 Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502 ||| ||| ||||||| | | || | | || | |||||||| || || ||| | Sbjct 2273539 TCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCC 2273598 Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTG---CCTCTACT-- 52557 ||||| | || || || ||||| || || |||||||| || || || ||||| || Sbjct 2273599 AACGAACTCATCTCTCGTGACGAGGGTCTCCACACGGATTTCGCTTGTCTCCTCTTCTCT 2273658 Query 52558 -ACAAGA-----CGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCA 52611 || || ||| | ||||| || ||| | ||||| || ||| Sbjct 2273659 CACCTGAACCACCGCCC-TGACCCCAAGGTTGT-TGAGGACATCAT--------TGTC-- 2273706 Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 ||||| || | |||||| ||||||| | || | ||| || || | ||||| | Sbjct 2273707 --GAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCCTGCTTG 2273764 Query 52672 GCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGC 52731 |||||||||| || ||||||| |||||||||||||||| || || ||||| | || Sbjct 2273765 GCATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTCCTCGTCG 2273824 Query 52732 AGCTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790 ||| |||| | | ||||||| ||| || || || || || || ||| | ||| Sbjct 2273825 CGCT-TGGCAACAAGAAGTACTATAACTCTGCGAACCCCTTCGACTTCATGGAGTCCATC 2273883 Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 || || | |||||||||||||| ||||||||||| ||||| || ||| || Sbjct 2273884 TCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAG 2273934 >seq12 Length=803095 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/184 (73%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| | ||| Sbjct 425495 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGA 425554 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | || ||||| ||||| || || || || || ||||| || | || || || | ||| Sbjct 425555 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 425613 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 425614 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 425672 Query 138603 AAAA 138606 ||| Sbjct 425673 GAAA 425676 >seq13 Length=801081 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | || ||| |||||| || || ||||||| | Sbjct 291915 CTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAA 291974 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540 ||| |||||||| || || || || ||||| || ||||| || | || | |||| | Sbjct 291975 GATAAGACGCTGCTGATCTGGGGGAATACCCTCCTTGTC-CTGGATCTTGCTCTTAACGT 292033 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | || ||||| || | ||| | || || ||||| || || || Sbjct 292034 TG-TCGATGGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTG 292092 Query 138601 ACAAAAATCTGCAT 138614 || ||||| ||||| Sbjct 292093 ACGAAAATTTGCAT 292106 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/196 (71%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | ||| || ||||| || || || |||| Sbjct 292369 GACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCG 292428 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| |||||||| ||||| ||||| ||||| || || || ||| | || | || | Sbjct 292429 AAGATCAGACGCTGCTGGTCAGGAGGGATACCCTCCTTATC-CTGAATCTTGGACTTGAC 292487 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||||| ||||| ||||| | || | || || || || || || | Sbjct 292488 GTTG-TCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTCT 292546 Query 138599 TTACAAAAATCTGCAT 138614 | || || || ||||| Sbjct 292547 TCACGAAGATTTGCAT 292562 Score = 87.8 bits (96), Expect = 2e-12 Identities = 126/174 (72%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||||||| ||||| ||||| || || || || | Sbjct 292597 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCG 292656 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538 | || || ||||| ||||| ||||| || ||||| || || ||| | || | || Sbjct 292657 AAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC-CTGAATCTTGGACTTGAC 292715 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592 |||| || | |||||||| ||||| ||||||| || | || || || |||| Sbjct 292716 ATTG-TCGATGGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTGCCGGTCA 292768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259943501120