Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20arizonense_20[genbank_20GCA_5F001773325.1_202016-10- 18] 396 sequences; 33,729,052 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq17 199 5e-46 seq1 156 5e-33 >seq17 Length=717694 Score = 199 bits (220), Expect = 5e-46 Identities = 568/865 (66%), Gaps = 15/865 (2%) Strand=Plus/Plus Query 116423 TAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTA 116482 |||||||||| | || |||| || || |||| | |||||| | || ||||||| | Sbjct 378778 TAGGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGA 378837 Query 116483 TAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTG 116542 | || || || |||| || || || ||| || |||| |||||| || || ||| Sbjct 378838 TGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCT 378897 Query 116543 TGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAA 116602 |||| || ||||||||||| ||||| | || | || ||||| || |||| || |||| Sbjct 378898 TGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCGGTCTCAGTCTGGGCCTCAAGAA 378957 Query 116603 TAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCG 116658 | || | ||| | | || | | || | ||| ||| | || ||||||| |||| Sbjct 378958 TGGCATACCAGAGCTTCTGAGCCTT----AATGGTCTTGCGGCCACGGCCCTCCTTCTCG 379013 Query 116659 TACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTA 116718 ||||| |||||| ||||| ||||| ||||| | || | ||| || | |||| Sbjct 379014 TACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCG 379073 Query 116719 TCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 116778 | || |||||||||| ||| | ||| ||||||| ||||||||||| || || || Sbjct 379074 TTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGA 379133 Query 116779 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 116838 ||||||| || ||||||||||||| ||| ||||||| | || || || || Sbjct 379134 GTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTGCGG 379193 Query 116839 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 116898 | || | || || | || ||| |||||||| || ||||| || | || | | || Sbjct 379194 AGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGATAGATGGCAAACGCACCG 379253 Query 116899 TTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATT 116955 ||| |||| |||||| || || | || || || || || || ||||| Sbjct 379254 GGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATA 379313 Query 116956 GGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACA 117015 |||| ||||||| || ||| || || || | ||| || | |||| | || Sbjct 379314 GGAACAATACCATTGGAGGAGCCGTTGGTTCCACCAATGTAGGAACCGGTGGCACGGATG 379373 Query 117016 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGA 117075 ||| | | || ||||||||| || || ||| ||||| || || | | ||| Sbjct 379374 CGGTGAACATTCAAACCAATACCACCAGCGGTCTTGGAGATCATAGCACAGGTCTTAAGA 379433 Query 117076 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 117135 || ||||||| || || || ||| | | ||| |||||||| | | Sbjct 379434 GTGTCGTAGATACCCTCAATGCTGTCTGCAGACATGTCGACCAGGAAGCAAGAAGCAAGC 379493 Query 117136 TGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC-CTTG 117194 || ||| || || | ||||||||||| || || | |||||| |||| ||| ||| Sbjct 379494 TGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTTTTG 379552 Query 117195 GGACATCTTATCGTAGGTCTCCA-AGACAGAGGGAATGTCTTCCCCGTGAATACCGATTG 117253 ||||||| | ||||||||| | || | | ||||| || ||||| ||||||| | Sbjct 379553 GGACATCAAGTGGTAGGTCTCAATAGCCTTCTCG-ATGTCCTCGCCGTGGATACCGACAG 379611 Query 117254 AGACCCGCATAAACATGTATTGGGG 117278 || ||||| | || || ||||| Sbjct 379612 CAACACGCATCAGCAGGTGCTGGGG 379636 >seq1 Length=2696425 Score = 156 bits (172), Expect = 5e-33 Identities = 302/441 (68%), Gaps = 6/441 (1%) Strand=Plus/Minus Query 127232 TAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCATA 127291 ||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||| Sbjct 2273930 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 2273871 Query 127292 AAATCAAATGGGTTCTTTGAGTTCCA--AATTGTTGGCACCCCAATCTGTTTGAGGAGAC 127349 || || || |||||| ||||| | | || ||| || || | |||||||| Sbjct 2273870 AAGTCGAAGGGGTTCGCAGAGTTATAGTACTTCTTGTTGCC--AAGCGCGACGAGGAGAC 2273813 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 | || | ||| |||| ||||||| |||| || | |||||| || | ||| || Sbjct 2273812 GGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGCCAC 2273753 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | || || ||||| || |||| ||| ||| || | || || || | |||| | | Sbjct 2273752 AGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCCTCGACAATGATGTCCT 2273693 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAAACTCT 127528 || | | |||| | | | | | || |||||| ||| || || Sbjct 2273692 CAACAACCTTGGGGTCAGGGCGGTGGT-TCAGGTGAGAGAAGAGGAGACAAGCGAAATCC 2273634 Query 127529 TGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGA 127588 |||||||||||||||||| ||||||||||| || |||||| ||||| ||||| ||| Sbjct 2273633 GTGTGGAGACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGA 2273574 Query 127589 CCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACA 127648 || |||||||| | |||||| || | || ||||||||||||||||| ||||| ||| Sbjct 2273573 CCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACA 2273514 Query 127649 CACGCGAACGCAAATAGACGC 127669 ||||| |||| |||||| Sbjct 2273513 GCAGCGAAGGCAACCAGACGC 2273493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504163139360