Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20arizonense_20[genbank_20GCA_5F001773325.1_202016-10-
18] 396 sequences; 33,729,052 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq23 145 1e-28
seq1 131 3e-24
seq6 116 6e-20
seq17 100 5e-15
>seq23
Length=448822
Score = 145 bits (160), Expect = 1e-28
Identities = 101/115 (88%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||||||||||||||| |||||||||| | || ||||||||||| ||||||
Sbjct 184962 GCTGCCAACTACCTCGACATCAAGGCCCTCCTCGACGTTGGCTGCAAGACCGTCGCCAAC 185021
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| |||||||| |||||||||||||| |||||| || |||
Sbjct 185022 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 185076
>seq1
Length=2696425
Score = 131 bits (144), Expect = 3e-24
Identities = 181/251 (72%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| ||| || || || ||| |||||| |||||||||||||| | |
Sbjct 2273947 TGACACCAGCCTTCTGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 2273888
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| ||||||| | ||| ||||| || | |||| ||||| | || |
Sbjct 2273887 GGGAGATGGACTCCATGAAGTCGAAGGGGTTCGCAGAGTTATAGTACTTCTTGTTGCCAA 2273828
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
||| | || || ||||| ||||| || || ||||||||||||||||| ||||||||
Sbjct 2273827 GCGCGACGAGGAGACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCA 2273768
Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||| | || ||||| ||| || | || ||| ||||| | |||||| | ||||||
Sbjct 2273767 TGCCAAGCAG-GCCACAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCC 2273709
Query 794130 TCGATGATGAT 794140
|||| |||||
Sbjct 2273708 TCGACAATGAT 2273698
Score = 91.5 bits (100), Expect = 2e-12
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | ||||||| ||| ||| |||||||| || || |||||
Sbjct 2273625 ACCCTCGTCACGAGAGATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACCACGCTT 2273566
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||||||||| ||||||| ||| ||| ||||| ||||| |||||||| || || ||
Sbjct 2273565 CTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACAGCAGCGAA 2273506
Query 794460 GCCGACGAGCCGC 794472
| | || || |||
Sbjct 2273505 GGCAACCAGACGC 2273493
>seq6
Length=1602901
Score = 116 bits (128), Expect = 6e-20
Identities = 125/163 (77%), Gaps = 2/163 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| ||||||||||||||||| |||||||||||| |||| || || ||| | |
Sbjct 1180889 GTACTTGGTAACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 1180830
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| ||||| |||| |||||||||||| |||| | ||| ||| |||||| || |
Sbjct 1180829 GATGAGGCGTACGGAGGTCTGGATCTCCCGGGAGGAGATGGTGGACTTCTTGTT-GTAAG 1180771
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| ||| || |||| |||||
Sbjct 1180770 CAGCCAGCTTGGAGGCCTCGGTAGCGACACGCTCGAAGATGTC 1180728
>seq17
Length=717694
Score = 100 bits (110), Expect = 5e-15
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 2071810 GCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGG 2071869
|||||| ||||| ||||| | |||||| ||| || | | || || ||| |||||
Sbjct 379068 GCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGA 379127
Query 2071870 TCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 2071929
|| ||||| || |||| |||||||| || || || || ||||| |||||||||
Sbjct 379128 TCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTC 379187
Query 2071930 TTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 2071989
|| || ||||| | |||| || || |||||||| |||||||| ||| ||||||
Sbjct 379188 TTGCGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGATAGATGGCAAAC 379247
Query 2071990 GCGCCCTTGCGCTTG 2072004
|| || |||||||
Sbjct 379248 GCACCGGGGCGCTTG 379262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916204275673844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |