Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20arizonense_20[genbank_20GCA_5F001773325.1_202016-10- 18] 396 sequences; 33,729,052 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 4e-12 seq5 87.8 1e-11 >seq13 Length=801081 Score = 89.7 bits (98), Expect = 4e-12 Identities = 293/453 (65%), Gaps = 2/453 (0%) Strand=Plus/Plus Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 || || || ||||| | ||| || | ||||| | || |||| | |||||| || | | Sbjct 50283 TCGATACCCTCGAAGAGAGAGTCGATCTCAATGGAGGTCTGAGCAGCAGAAGAGAGGGTA 50342 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG-ATTCAA 282138 || |||||||| || || || || | || | || | ||| || | | | | ||| Sbjct 50343 CGCTTAGCACGCTCGCAAGCAGTGCGGAGACGACGGAGGGCACGGGC-GTTGGTAGTCAG 50401 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 282198 || | || | || | |||||| || | || | | || ||||| || || || Sbjct 50402 GTCCTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTGACGAGACGGTTGTCGAA 50461 Query 282199 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 282258 || ||||| || | | ||||| || | || | | || | ||| | || || || Sbjct 50462 GTCCTCACCACCAAGGTGAGTATCACCAGCAGTGGACTTGACCTCGAAGATACCCTCCTC 50521 Query 282259 AAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 282318 | | | |||| ||||| ||| |||||||||| ||| || || || || || Sbjct 50522 GATGGTGAGGAGAGACACATCGAAGGTACCACCACCCAGATCGAAGATCAGGACGTTGCG 50581 Query 282319 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 282378 || || || || |||||||| || || | ||||||||||| || || ||||| Sbjct 50582 CTCACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCAGCAGTGGGCTCGTTAAT 50641 Query 282379 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 282438 || | | ||||| ||||||||||| || ||||| || ||||| || | || || Sbjct 50642 GATACGGAGGACATTGAGACCAGCAATGAGACCGGCATCCTTGGTGGCCTGACGCTGAGA 50701 Query 282439 ATCGTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||||| || || || || ||||| || || || Sbjct 50702 GTCGTTGAAGTAGGCGGGGACAGTGATGACAGC 50734 >seq5 Length=1609945 Score = 87.8 bits (96), Expect = 1e-11 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191 |||||| |||||||| | |||||||||||||| ||| ||||| |||| ||| | || || Sbjct 1306683 TGAATTCTTCTTCCACGCTATGGCTGGTCGTGAGGGTCTTATTGATACCGCTGTCAAGAC 1306742 Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239 ||| || |||||||| || || | || || |||||| || ||||| Sbjct 1306743 TGCCGAGACTGGTTACATCCAGCGTAAGCTGGTCAAGGCTCTGGAAGA 1306790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740610958073496