Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20brasilianum_20[genbank_20GCA_5F001048715.1_202015-07- 01] 87 sequences; 35,888,622 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq9 113 5e-20 seq1 100 3e-16 >seq9 Length=1395533 Score = 113 bits (124), Expect = 5e-20 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||| ||||| || | || ||||||||| || ||||| || | |||||| || | Sbjct 543201 ACGCAGCACCAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAGAGTGCGACC 543142 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||||||||| || || ||||| ||||| | || | | |||||| Sbjct 543141 GTCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACCCTCCTT 543082 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTG 43145 | | ||| | || | |||| ||| | | | |||||||| || || || || | || Sbjct 543081 AT-CTTGAATCTTAGACTTGA-CGTTGTCGATGGTGTCGCTAGACTCAACCTCCAGGGTA 543024 Query 43146 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| || || || || ||||| || ||||||||||| Sbjct 543023 ATGGTCTTTCCGGTCAGGGTCTTAACGAAGATTTGCAT 542986 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| || | || ||| || || || ||||| |||| || || || |||| || Sbjct 542967 CACCAAGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTC 542908 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||||| || ||||| || || ||||||||||||| || | || |||||| || Sbjct 542907 GAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTG 542848 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | | | | ||||||| || ||||| || | || ||||| || Sbjct 542847 GATCTTGCTCTTCACATTGTCGATCGTGTCGGAAGACTCCACCTCCAAAGTAATGGTCTT 542788 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| || || || ||||| Sbjct 542787 GCCAGTGAGGGTCTTGACGAAAATCTGCAT 542758 Score = 86.0 bits (94), Expect = 7e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||||| || | || || |||||||| || ||||| Sbjct 542389 CTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGACCATCCTCGAGCTGCTTGCCGGCGAA 542330 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | || |||||||||| ||| | || | |||| Sbjct 542329 GATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGT 542271 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | | | |||||||| || ||||| || | ||||| || ||||| || Sbjct 542270 TATCGATGGTGTCGCTGGACTCCACCTCAAGGGTGATAGTCTTGCCGGT 542222 >seq1 Length=4658073 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || |||||| || | || || |||||||| || ||||| | Sbjct 1499566 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1499507 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||||||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 1499506 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 1499448 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || || |||| || ||||| || ||||| || ||||| || Sbjct 1499447 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1499388 Query 43173 AA 43174 || Sbjct 1499387 AA 1499386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816978148360