Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20brasilianum_20[genbank_20GCA_5F001048715.1_202015-07- 01] 87 sequences; 35,888,622 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9 150 2e-31 seq1 141 1e-28 seq2 96.9 4e-15 >seq9 Length=1395533 Score = 150 bits (166), Expect = 2e-31 Identities = 176/235 (75%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| | ||| || | | ||||| |||||| || | ||| |||||||||||| ||||| Sbjct 543219 TTACTGGCCACCACGCAGACGCAGCACCAGGTGGAGGGTAGACTCCTTTTGGATGTTGTA 543160 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 ||| || |||||||| |||| ||||||||||| || ||||| |||| |||||| ||||| Sbjct 543159 GTCCGACAGAGTGCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTC 543100 Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCC-ACCGTGTCGCTCG 46538 | || | | |||||| || ||||| ||||| ||| | | | |||||||| | Sbjct 543099 TGGGGGAATACCCTCCTTATCTTGAATCTTAGACTTGA-CGTTGTCGATGGTGTCGCTAG 543041 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || |||| || ||||| || || ||||| || ||||| ||||||||||| Sbjct 543040 ACTCAACCTCCAGGGTAATGGTCTTTCCGGTCAGGGTCTTAACGAAGATTTGCAT 542986 Score = 132 bits (146), Expect = 5e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||| ||||| || | ||| |||||| ||||| ||||||||||| ||||| || | Sbjct 542412 CGCAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTACGACCA 542353 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||||||||| |||| |||||||||||| | || | || ||||||| Sbjct 542352 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTG 542293 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 ||| ||||| ||||| | | | |||||||| || ||||| || | ||||| Sbjct 542292 TCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCCACCTCAAGGGTGATA 542233 Query 46559 GTTTTGCCCGT 46569 || ||||| || Sbjct 542232 GTCTTGCCGGT 542222 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| || | ||| ||| || ||||| |||||||| || || ||||| |||| || Sbjct 542967 CACCAAGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTC 542908 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||||||| || | ||||||||||||| || | || |||||| || Sbjct 542907 GAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCTTG 542848 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| |||| | | | | ||||||| || ||||| |||| || ||||| || Sbjct 542847 GATCTTGCTCTTCACATTGTCGATCGTGTCGGAAGACTCCACCTCCAAAGTAATGGTCTT 542788 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || || || ||||| Sbjct 542787 GCCAGTGAGGGTCTTGACGAAAATCTGCAT 542758 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||| |||||| ||||| ||||||||||| || ||||| | || || Sbjct 542738 ACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCA 542679 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||||||||| || || |||| |||||| ||||||| || | || |||||||||| Sbjct 542678 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGA 542619 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | |||||| || || || || | ||||| || ||| Sbjct 542618 ATCTTGGACTTGACATTATCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTG 542559 Query 46565 CCCGTCAGCGTTTTAAC 46581 || ||||| || || || Sbjct 542558 CCAGTCAGGGTCTTGAC 542542 >seq1 Length=4658073 Score = 141 bits (156), Expect = 1e-28 Identities = 142/182 (78%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| |||||||| | || |||||||||||||||||||| | Sbjct 1499566 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1499507 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||||||| |||||| |||||| ||| | Sbjct 1499506 TCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 1499448 Query 46524 CC-ACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | || ||||| || |||||||| || || || Sbjct 1499447 TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1499388 Query 46583 AA 46584 || Sbjct 1499387 AA 1499386 >seq2 Length=4221945 Score = 96.9 bits (106), Expect = 4e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| | || |||||||||||||| ||||| Sbjct 3043639 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 3043580 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||| |||||||||||| | || | | |||||| || ||| Sbjct 3043579 GATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCTATG 3043537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237785303240