Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20brasilianum_20[genbank_20GCA_5F001048715.1_202015-07- 01] 87 sequences; 35,888,622 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq9 132 1e-25 seq1 98.7 2e-15 seq76 95.1 3e-14 seq54 89.7 1e-12 seq2 86.0 1e-11 >seq9 Length=1395533 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||| ||||||||||| || || || |||| ||||| |||| | ||| Sbjct 542419 ACGAAGGCGCAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGAGT 542360 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| || |||||||| || || || ||||| || || || || Sbjct 542359 ACGACCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCC 542300 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| || ||||| ||| || ||||||||||| || ||||| || | Sbjct 542299 CTCCTTGTCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCCACCTCAAG 542240 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 542239 GGTGATAGTCTTGCCGGT 542222 Score = 131 bits (144), Expect = 4e-25 Identities = 162/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| || || || ||||||| ||||| || | || ||| Sbjct 543207 ACGCAGACGCAGCACCAGGTGGAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAGAGT 543148 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || |||||||| || |||||||| Sbjct 543147 GCGACCGTCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCTGGGGGAATACC 543088 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| ||||| ||| || ||||||||||| | || || || | Sbjct 543087 CTCCTTATCTTGAATCTTAGACTTGACGTTGTCGATGGTGTCGCTAGACTCAACCTCCAG 543028 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || |||| || || | ||| | |||||| Sbjct 543027 GGTAATGGTCTTTCCGGTCAGGGTCTTAACGAAGATTTGCAT 542986 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||| || || || || || |||| ||||| |||| | || | ||||| Sbjct 542741 AGGACCAAGTGCAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCC 542682 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || || ||||||||||| || || || |||||||| Sbjct 542681 TCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC 542622 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| ||||||||||| || | || || || | ||||| ||| Sbjct 542621 TGAATCTTGGACTTGACATTATCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATAGTC 542562 Query 225682 TTGCCCGTCA 225691 ||||| |||| Sbjct 542561 TTGCCAGTCA 542552 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || ||||| |||| ||||| || | | || | || || Sbjct 542969 AGCACCAAGTGAAGGGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCC 542910 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| ||||| || || |||||||| ||||| || ||||| ||| Sbjct 542909 TCGAGCTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT 542850 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||| ||||| || | ||||| || || || || ||| Sbjct 542849 TGGATCTTGCTCTTCACATTGTCGATCGTGTCGGAAGACTCCACCTCCAAAGTAATGGTC 542790 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 542789 TTGCCAGTGAGGGTCTTGACGAAAATCTGCAT 542758 >seq1 Length=4658073 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || ||| | ||||| || |||||||| || |||||||| Sbjct 1499564 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 1499505 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || || || || |||||||| |||||||| ||| || ||| Sbjct 1499504 AGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 1499445 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || ||||| | || || ||||| ||||||| || || | ||| Sbjct 1499444 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1499386 >seq76 Length=1326 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 7724 TATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGC 7783 ||| || || |||||||| ||||| ||||| ||| |||||| || ||| |||| |||| Sbjct 911 TATGTCAAGCCTTGGTAAGGTTCTTCGCGTTGCATCGAATTAATCCGCATGCTCCGCCGC 852 Query 7784 TTATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 || | | | |||||| || |||||||||||| |||||||| |||| | | |||| || Sbjct 851 TTGTGCGGGCCCCCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGG 792 Query 7844 AATA-TTTACGCGTTAGCT 7861 | || | ||||||||| Sbjct 791 GGCACTTAATGCGTTAGCT 773 >seq54 Length=2656 Score = 89.7 bits (98), Expect = 1e-12 Identities = 186/274 (68%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| ||| ||||| || | || ||||| |||||| | || Sbjct 2143 ACTTTATATTTAATGTTTTCATTATTTTCAGGGTTAATTGGTACAGCATTTTCAGTACTT 2084 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATATTGAGTGGTAATAGCCAACTTTA 7559 ||||| ||||| | | | || || ||| ||||| | |||| ||| | || Sbjct 2083 ATAAGATTAGAGCTTTCAGGACCAGGGGTACAATATATTTCA-GATAAT---CAATTATA 2028 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| || || || ||||| | | |||||||||||| | |||||||| | | | Sbjct 2027 TAATAGTATAATAACAGCTCATGCTATAATGATGATTTTCTTTATGGTTATGCCAGCTTT 1968 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || ||||| || |||| || | || ||| | | || | ||| |||||||| || Sbjct 1967 AATCGGTGGTTTTGGTAATTTTTTATTACCATTATTAGTAGGAGGTCCAGATATGGCATT 1908 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||||| | || ||||||||||| |||||| || Sbjct 1907 CCCAAGATTAAATAATATAAGTTTCTGATTATTA 1874 >seq2 Length=4221945 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || ||||| || || |||| ||||| || | | ||| | ||||| Sbjct 3043659 AGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 3043600 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || || ||||| ||||| ||| Sbjct 3043599 TCGAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATACCCTCCTTATCT 3043540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529870700378