Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20brasilianum_20[genbank_20GCA_5F001048715.1_202015-07- 01] 87 sequences; 35,888,622 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq9 149 2e-30 seq1 123 6e-23 seq13 111 4e-19 >seq9 Length=1395533 Score = 149 bits (164), Expect = 2e-30 Identities = 145/187 (78%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| |||||||| | ||||||||||| |||||||| Sbjct 542220 TCACCGGCAAGACTATCACCCTTGAGGTGGAGTCCAGCGACACCATCGATAACGTCAAGT 542279 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 |||||||||||||| || || ||||| || |||||||| || || ||||||||||| | Sbjct 542280 CCAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCA 542339 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | |||||||| ||||| | |||||| |||| || ||| |||| || || || || || | Sbjct 542340 AGCAGCTCGAGGATGGTCGTACTCTTTCCGACTACAACATCCAGAAGGAGTCTACTCTCC 542399 Query 178123 ATCTTGT 178129 | || || Sbjct 542400 ACCTGGT 542406 Score = 132 bits (146), Expect = 1e-25 Identities = 149/198 (75%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || |||||||||||||| || || |||||||||| Sbjct 542540 TCGTCAAGACCCTGACTGGCAAGACTATCACCCTCGAGGTTGAGTCTTCCGACACCATCG 542599 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || ||||| |||||||||||||| || || ||||| || ||||| || || || | Sbjct 542600 ATAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAACAGCGCCTGA 542659 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 |||| || || || ||||| || ||||| | || ||| |||| || ||| |||| || | Sbjct 542660 TCTTTGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGG 542719 Query 178111 AATCAACACTGCATCTTG 178128 | || || ||||| |||| Sbjct 542720 AGTCTACCCTGCA-CTTG 542736 Score = 122 bits (134), Expect = 2e-22 Identities = 153/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||||| || || || || ||||| || || ||||| ||||| || ||| Sbjct 542989 CAAATCTTCGTTAAGACCCTGACCGGAAAGACCATTACCCTGGAGGTTGAGTCTAGC--- 543045 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||||||||| |||||||| |||||||| || || || || || || || ||||| Sbjct 543046 GACACCATCGACAACGTCAAGTCTAAGATTCAAGATAAGGAGGGTATTCCCCCAGACCAA 543105 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || || |||||||| || || |||||||| || || | ||||| | || || ||| Sbjct 543106 CAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAGGACGGTCGCACTCTGTCGGACTACAAC 543165 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||||| || || || || || || || Sbjct 543166 ATCCAAAAGGAGTCTACCCTCCACCTGGT 543194 >seq1 Length=4658073 Score = 123 bits (136), Expect = 6e-23 Identities = 138/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 1499385 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 1499441 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 1499442 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAGCAGCG 1499501 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | ||||| ||| || ||| |||| Sbjct 1499502 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCA 1499561 Query 178106 AAA 178108 || Sbjct 1499562 GAA 1499564 >seq13 Length=632285 Score = 111 bits (122), Expect = 4e-19 Identities = 191/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 214128 GTTTTTCTGGTTGCTTTT---GCGGCAAATGGCATCTTTGTATGCGATGAAAGGCATTCC 214184 ||| ||||||||||| || | |||| ||||| ||||| ||||| || | || Sbjct 445909 GTTCTTCTGGTTGCTCTTCTTGTTGCAA---GCATCCTTGTACAGCATGAAGGGGTTACC 445965 Query 214185 CACCTCGACTTGAGCGACAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTT 214244 |||| ||||| | || || || ||| || | || ||||| | | ||| Sbjct 445966 AGTCTCGGTCTGAGCCTCGAGGATAGCATACCACAGCTTCTGAGCCTTAATGGTCTTACG 446025 Query 214245 GGCTCTTCCCTCGTTTTCGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATC 214304 | | | ||||| || ||||| ||||| |||| ||||| || ||| |||||||| Sbjct 446026 GCCACGACCCTCCTTCTCGTAGCGCTCATACAGAGCATCAAACTCATCACCATAGACATC 446085 Query 214305 ATCAAGACCGGGAGCCTCGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCT 214364 |||||||||||||||||||||||||||| ||| |||||| || || || || | Sbjct 446086 GGCAAGACCGGGAGCCTCGTTGGGGCAGAACAGAGTCCATTCGCCGTTGGCCTCAACACG 446145 Query 214365 TTTCATGAAAAGGTCGGAAGTCCAGATTGCATAAAA 214400 |||||||| || |||| |||||| | ||||| || Sbjct 446146 CTTCATGAAGAGATCGGGAGTCCACAGGGCATAGAA 446181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729858215878