Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq61 96.9 4e-15 >seq61 Length=2613024 Score = 96.9 bits (106), Expect = 4e-15 Identities = 195/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 ||||| ||||| |||||||| ||| | |||||||| ||||||||||| ||||| Sbjct 817797 ATATAAGTATCAATGAGTAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 817738 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || || | || || || || || ||| || || | || Sbjct 817737 AAACCGTAGAAGCAACGAGCCTCGGGAATCTGGACCTCTCCGCTGAAACGCTCGACCAGG 817678 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 |||||||| ||||| |||||| || ||||| || || | | || ||||| || Sbjct 817677 TTTTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTAA 817618 Query 17414 TTTTCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 || || || || | | ||||||| | | ||| ||||||| ||| | || Sbjct 817617 CGCTCATCATCGTTGAGGCGGTTGTGCCAGTCGTGGAGATCCTTGGATAGATCAATCTCC 817558 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 || | |||||| ||| ||| | ||||| || ||||| | ||| || Sbjct 817557 TCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 817511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545179494200