Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq61 93.3 4e-14 >seq61 Length=2613024 Score = 93.3 bits (102), Expect = 4e-14 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| |||||||| |||| | ||| | || ||||| |||||||| || ||||| Sbjct 817797 ATATAAGTATCAATGAGTAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 817738 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || || |||||||| |||||||| | || || || || || || || || ||||| Sbjct 817737 AAACCGTAGAAGCAACGAGCCTCGGGAATCTGGACCTCTCCGCTGAAACGCTCGACCAGG 817678 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651 || || || ||||||||||| ||||| || || || | | ||| ||||| || Sbjct 817677 TTTTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAAGTAA 817618 Query 16652 TTTTCGTCA--GATG-TAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708 || ||| | || | | ||||| || | | ||| ||||||| ||| | || Sbjct 817617 CGCTCATCATCGTTGAGGCGGTTGTGCCAGTCGTGGAGATCCTTGGATAGATCAATCTCC 817558 Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 || | ||||| || ||| | ||||| || ||||||| ||| || Sbjct 817557 TCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 817511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511413984475800