Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq56 123 3e-23
seq61 120 4e-22
>seq56
Length=3289960
Score = 123 bits (136), Expect = 3e-23
Identities = 367/564 (65%), Gaps = 8/564 (1%)
Strand=Plus/Minus
Query 53705 GCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 53764
|||| ||| |||| || ||||| || ||||||| || | | || | || ||||||
Sbjct 1940643 GCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCA 1940584
Query 53765 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 53824
||||| || || | || ||||| | || | || || ||||| ||||| ||
Sbjct 1940583 GTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 1940524
Query 53825 GCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTC 53884
|||||||| || || ||||| || ||||||| ||| |||||| || | ||| || | |
Sbjct 1940523 GCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATAC 1940464
Query 53885 CAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGT----GT 53940
|||| ||||||| || | || | | ||| ||| || | ||
Sbjct 1940463 CAGAGCTTCTGAGCCTTAATGGTC--TTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGT 1940406
Query 53941 ATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACA 54000
| | | | || ||||| || || | |||| | | |||| || | || ||
Sbjct 1940405 AGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCA 1940348
Query 54001 CATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAG 54060
| | | ||| || |||| | ||| || || ||||| || ||||||||| |||| ||
Sbjct 1940347 GAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAG 1940288
Query 54061 AGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 54120
||| || ||||| | || | | ||| || || || ||||| ||||||||
Sbjct 1940287 AGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAG 1940228
Query 54121 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTT 54180
|||| | | | ||| | ||||| || |||| ||| |||| | | ||||| || ||
Sbjct 1940227 GAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTT 1940168
Query 54181 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 54240
||| || ||||| || | ||| | || |||||||| | || | | ||| |||| |||
Sbjct 1940167 GTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAAT 1940108
Query 54241 ACCATTGGATGCACCATTGGTCCC 54264
||||||||| | |||||||| ||
Sbjct 1940107 ACCATTGGAGGAGCCATTGGTTCC 1940084
>seq61
Length=2613024
Score = 120 bits (132), Expect = 4e-22
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
||| |||||||| ||| ||||||||||| | | ||| | ||||||||| || |||||
Sbjct 818121 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 818062
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
|||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||
Sbjct 818061 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 818002
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAA 24279
|| || || || || || |||||||
Sbjct 818001 GATACCCTCGACAGCAGCGAAGGCAA 817976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721117601200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |