Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq61 185 9e-42 seq2 141 1e-28 seq55 132 5e-26 seq12 98.7 1e-15 >seq61 Length=2613024 Score = 185 bits (204), Expect = 9e-42 Identities = 200/259 (77%), Gaps = 7/259 (3%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| |||||| | || || Sbjct 817511 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATCTA 817570 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 |||||||| | | | ||||||| | ||| | ||||| | ||||| | |||||| Sbjct 817571 TCCAAGGATCTCCA-CGACTGGCACAACCGCCTCAACGATGATGAGCGTTACTTCATCTC 817629 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||||| || ||||| ||||| ||| |||||| ||||||||||| || ||||||||||| Sbjct 817630 CCACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGTCGAGCG 817689 Query 116812 TTTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCA 116870 |||| || | ||||| ||| | ||||||| || ||||||||||| || |||||| | Sbjct 817690 TTTCAGCGGA-GAGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGA 817748 Query 116871 TGGAGAACGTGCACTCGGA 116889 |||||||| | ||||| || Sbjct 817749 TGGAGAACATCCACTCCGA 817767 Score = 156 bits (172), Expect = 4e-33 Identities = 313/456 (69%), Gaps = 6/456 (1%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||||||||| | || |||||| | || ||| | |||||| ||| | Sbjct 817913 AGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCGTC 817972 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| |||||||| || |||||||| ||||||| || || |||||| |||| || | Sbjct 817973 TGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTCT 818032 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || || |||||||| || || ||| |||||| ||||| || | | Sbjct 818033 GGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCGTG 818092 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACC-G 117220 |||||||||| || || || || ||| | || ||| || || || || || | Sbjct 818093 ACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCACCTGAACCACCGCCCTG 818152 Query 117221 AGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 | | | | ||| || ||| | ||| || || | ||||||||| |||||| Sbjct 818153 ATC-CCAAGGTCGTTGAAGACATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTC 818211 Query 117281 ACCGAAGCGC-TGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACA 117338 || || || | | || ||| | ||||| || | || || || | |||| || |||| Sbjct 818212 ACTGACGCTCTTCCCTGTG-GCCTGCTTGGCATGAA-CGCCAAGCTCATGTGCCAGTACA 818269 Query 117339 TCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGC 117398 ||||||| ||||| ||| | || || | | || | | | ||| |||||||| | Sbjct 818270 TCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAACTCTG 818329 Query 117399 CCAACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||||||| | ||||| ||| | ||||||| ||| Sbjct 818330 CCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 818365 >seq2 Length=3819764 Score = 141 bits (156), Expect = 1e-28 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| |||||||| || ||||| || || |||||||| | || || || | || Sbjct 1934166 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 1934225 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| || || ||||| ||||| | ||||| Sbjct 1934226 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 1934284 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || || ||||| || || | ||||| ||| ||||||||| Sbjct 1934285 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAA 1934344 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 1934345 CATCCAGAAGGAGTCCACTCTCCATCTCGT 1934374 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || ||||| ||||| |||||||| | || || ||| | | Sbjct 1934622 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 1934681 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | ||| || || | ||||| ||||| |||||| | ||||| Sbjct 1934682 GACACGATCGACAACGTT-AAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCA 1934740 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| |||| ||||||||| |||||||| Sbjct 1934741 GCAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGACGGGCGCACCCTTTCTGACTACAA 1934800 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| || ||||| Sbjct 1934801 TATCCAGAAGGAGAGTACCCTGCA 1934824 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || |||||||| | || || || | | Sbjct 1934394 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 1934453 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| ||||| ||| || | || || || ||||||||| | ||||| Sbjct 1934454 GATACCATCGATAACG-TCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 1934512 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| || || || ||||| || || | |||||||| ||||||||| Sbjct 1934513 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 1934572 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| ||||| |||| ||||| || || Sbjct 1934573 CATCCAAAAGGAATCCACTCTGCACCTTGT 1934602 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 || ||||| |||||||| | || || || | |||||| | | | | ||||| Sbjct 1933962 ACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGTCC 1934021 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| || || || ||||| || | |||||||| || || || | ||| ||||| Sbjct 1934022 AAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCAAG 1934081 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| || || | || ||||| | |||||||||||| ||||||||| |||| || || Sbjct 1934082 CAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCCACCCTTCAC 1934141 Query 40894 CTAGT 40898 || || Sbjct 1934142 CTTGT 1934146 >seq55 Length=3282825 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| |||||||||| | | ||||| | | Sbjct 2334011 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2333952 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| | |||||||| || || Sbjct 2333951 GACAACG-TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCCT 2333893 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | |||||||| | |||||||||||||||||| Sbjct 2333892 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2333833 Query 40878 GG 40879 || Sbjct 2333832 GG 2333831 >seq12 Length=2198207 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||| |||||| | |||||||| || || |||| ||| ||||| ||||| || Sbjct 1200290 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1200349 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||| ||||| || ||||||||||||||||||||| | || || || || || | Sbjct 1200350 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 1200409 Query 40903 CGCTTGAGGGGCGGCGG 40919 ||| || | || || || Sbjct 1200410 CGCCTGCGTGGTGGTGG 1200426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218781384400