Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 114 1e-20 seq55 107 2e-18 >seq2 Length=3819764 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| || ||||| || || |||||||| ||| | |||||| |||||| ||||| Sbjct 1934368 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGC 1934309 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 ||||| ||| |||||||||||||||| |||||||| || |||||||| || ||| || Sbjct 1934308 TTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTG 1934249 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 || || | |||| |||||| | ||| || || | || | || || ||||| Sbjct 1934248 GACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTTCCGGTG 1934189 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || || ||||| Sbjct 1934188 AGGGTCTTTACGAAGATTTGCAT 1934166 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||||||| || || |||||| ||||| || || Sbjct 1934134 GTGGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCT 1934075 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | || || |||||||| || ||||| ||||| ||||| || ||| || || Sbjct 1934074 GCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTGGACTTG 1934015 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCA 118716 || | |||| |||||| | ||| ||||| | || | || |||||||||| Sbjct 1934014 ACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 1933960 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | ||| ||| || || || ||||| || | |||||| ||||| Sbjct 1934831 CACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTC 1934772 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 ||||| || || ||| |||| ||||||||||| || || || || ||||||||||| Sbjct 1934771 CAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTG 1934712 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTT 118707 || || ||||| | |||| ||||| | || | || || || | || | || | Sbjct 1934711 GATCTTGCTCTTAACGTTGTCGATCGTGTCAGATGAT-TCCACTTCCAGCGTGATGGTCT 1934653 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || |||||||| ||||| Sbjct 1934652 TGCCAGTGAGTGTCTTGACAAAAATTTGCAT 1934622 >seq55 Length=3282825 Score = 107 bits (118), Expect = 2e-18 Identities = 135/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610 || || |||||||| ||||||| ||||| |||||||||||| || || ||| |||| Sbjct 2333833 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2333892 Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668 || |||||||| || || || ||||||||||||| ||| | | || || || || | | Sbjct 2333893 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 2333950 Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728 ||| |||||| | |||||| |||| ||| | || || || ||||| || || || | Sbjct 2333951 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2334010 Query 118729 AA 118730 || Sbjct 2334011 AA 2334012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830056324980