Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq56 273 2e-68 seq61 131 1e-25 seq2 98.7 9e-16 seq55 86.0 6e-12 >seq56 Length=3289960 Score = 273 bits (302), Expect = 2e-68 Identities = 592/878 (67%), Gaps = 6/878 (1%) Strand=Plus/Minus Query 23102 ATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTAC 23161 || || |||| || |||||||||| || ||||| | ||||||||| |||||| | Sbjct 1940562 ATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAG 1940503 Query 23162 GGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACA 23221 || | || ||||| ||| | ||| | || || ||| | ||||||| | || Sbjct 1940502 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAATG 1940443 Query 23222 CGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACC 23280 ||| || | | ||| || | ||||||||| | ||| | || || || || |||| Sbjct 1940442 -GTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACC 1940384 Query 23281 GTA-ACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCAT 23339 ||| ||| || || || || | | | | || || | |||| |||| || | Sbjct 1940383 GTAGACA-TCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAG 1940325 Query 23340 TTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGC 23399 ||||| || |||| || ||||| || |||| ||||||||||| || || ||||| | Sbjct 1940324 CCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCAC 1940265 Query 23400 GCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCC 23459 | || || || || ||| |||||| | ||| | || || || || || || |||| Sbjct 1940264 GAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCC 1940205 Query 23460 ACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAAC 23519 | ||||| ||||| | ||||||||| || || | ||| || || ||||| || ||||| | Sbjct 1940204 AGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGC 1940145 Query 23520 GGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGC 23579 |||| ||||| ||| |||| | ||||| || || | ||| ||||| | ||| | Sbjct 1940144 GGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGAGGAGCC-ATTGGTT 1940086 Query 23580 CCGCCACACT-CGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCC 23638 || ||| | ||||| | || || | | |||||| | ||||| ||||| || | Sbjct 1940085 CCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATTCAAACCAATGCCACCAGCG 1940026 Query 23639 GATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCT 23698 | || || ||||| || || || |||||||||||||| ||||| |||||||| | Sbjct 1940025 GTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATACCCTCAATGCTGTCTGCG 1939966 Query 23699 TTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGT 23758 | |||||| ||| || |||| | || | | ||| || ||||| ||| || Sbjct 1939965 GACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGA 1939906 Query 23759 GTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCA 23818 || ||| |||||| || ||||| | ||||| | | ||| || || ||||| Sbjct 1939905 GTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGTGGTAGGTCTCAATGGCCTTC 1939846 Query 23819 TCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCG 23878 || |||||||| ||||| ||||||| || |||||||||| || || || || | |||| Sbjct 1939845 TCGATGTCCTCGCCGTGGATACCGACAGCAACGCGCATCAGCAGGTGCTGGGGACGCTCG 1939786 Query 23879 ACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAG 23938 | |||||| || || ||||||||||| | || || || || || || || Sbjct 1939785 GCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCAGGGTCTTGAAACCGAAGAAG 1939726 Query 23939 TCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 | ||||| ||||| || |||| || |||||||| || Sbjct 1939725 TTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTT 1939688 Score = 114 bits (126), Expect = 1e-20 Identities = 417/650 (64%), Gaps = 7/650 (1%) Strand=Plus/Minus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 ||||||| | || |||||||| |||||||||||||||||||| || || || || | Sbjct 1941521 TGGTGCGCAAGTAGTACATGCCGGTCTTCAGACCCATCTTCCAGCCGGCGAAGTGCATGG 1941462 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | ||| | || || | || | ||||| ||| |||| Sbjct 1941461 AGGTGATCTTGCCCATGGTGGGCTCCTTCAGGTGGATGTTCAGGGACTGGGACTGGTCGA 1941402 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | | || || || ||||||||||| | | | ||||| || |||||||| |||| Sbjct 1941401 TGTAGGCACCGCGGTCGGCGGCCATCTGCAGGATGTTACGCTGGGAGATTTCCCAGACGG 1941342 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 ||||||| || | |||| || || || ||| |||||||||| ||| | Sbjct 1941341 TCTTGTAGAGGGCCTTGATGTCGGCGGGAATGTTGGGGATGTTCTGGACGGAGCCGCCGT 1941282 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 | ||||| || || || | ||| ||||||||||| | || | || || | Sbjct 1941281 CGGCGATGATACGGTTCTTCATGTTGTCGGACCACAAACCGAGGTCGACAAGGTCCTTCA 1941222 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || |||| || || || ||||| |||| || ||| ||||| ||| ||||| | Sbjct 1941221 GGAGCCAGGGGTTGACGACCTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCG 1941162 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | || ||||| | || ||| || || |||||| ||| || || || |||| Sbjct 1941161 AGGTGTAGGGCTCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCA 1941102 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCG 22622 | || || | ||| || ||| | | || || | || || ||| || | Sbjct 1941101 TGGGAGCGACCAGCAGACTGTTGCGGACACCAGTCTCGGCGATCTTGGCCTTCAGAGAAG 1941042 Query 22623 ACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC-- 22680 ||||||||| || || | || || | ||||||||| ||||| |||| | ||| Sbjct 1941041 CCCAGTCCCAGAGGTCAGTGGGAGT---ACGGTCCCACATGTCGTACTGCAGGATGCCCT 1940985 Query 22681 GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCA 22740 |||| || ||| ||| ||| || ||||| | ||| | ||| || ||| | Sbjct 1940984 GCGAGACG--GGGGAGCCGGGGTAGGTCTCGTAGGTACCGAGCTGCTTGGCCAGGTCGGA 1940927 Query 22741 GCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCA 22790 | || || || |||| || |||||||||||||| | |||||| Sbjct 1940926 GGAGGCAGTCAGGGCACCGTGGTAGATAGTCTCGAAGATCTGGATGTTCA 1940877 >seq61 Length=2613024 Score = 131 bits (144), Expect = 1e-25 Identities = 266/389 (68%), Gaps = 16/389 (4%) Strand=Plus/Plus Query 57909 ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCC 57968 || ||||||||||| |||||| | ||| ||||| || | | | | || ||||| Sbjct 817906 ATTGCCAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCT 817965 Query 57969 GAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCA 58028 | | || | || ||||| || ||||| ||||| ||||| || || ||| || | Sbjct 817966 TCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCC 818025 Query 58029 ATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATA 58088 || || ||| | ||||| || || ||||||||||| || || || |||||| | || Sbjct 818026 ATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATT 818085 Query 58089 TCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAAT 58148 || || |||||||||||||| |||||||| || || || | | ||||||| | Sbjct 818086 TCTCGTGACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCTCAC-------CT 818138 Query 58149 AAACCGACG-CGGGATCGCA---TC-TTG--GACATTATCACCGAGGCGGTCGCGATCGA 58201 |||| || | |||| || || ||| ||||| || |||||| || | ||||| Sbjct 818139 GAACCACCGCCCTGATCCCAAGGTCGTTGAAGACATCATTGTCGAGGCCGTTGGTATCGA 818198 Query 58202 AAATGAGTTTGTCACCGAAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGA 58260 | ||||| |||| || || | | || |||||| |||| || |||||| | | | Sbjct 818199 GCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCC-TGCTTGGCATGAACGCCAAGCTCA 818257 Query 58261 TGTCAAAGTACATTGAGTTTGTTGCCGAC 58289 ||| ||||||| |||||||| || ||| Sbjct 818258 TGTGCCAGTACATCGAGTTTGTCGCTGAC 818286 >seq2 Length=3819764 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||||||||| || || || || || ||||| | || ||||| | ||| Sbjct 1934166 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 1934225 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||| ||||| || | || ||||||||| Sbjct 1934226 GACACCATCGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCAG 1934285 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||| || || ||| | || || | ||| | ||| || ||| Sbjct 1934286 CAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAAC 1934345 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 || || || || || ||||| ||||| || || Sbjct 1934346 ATCCAGAAGGAGTCCACTCTCCATCTCGTCCT 1934377 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || || || || ||||| | || || || |||| Sbjct 1934394 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 1934453 Query 31253 GACAGTGTCGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| || || || ||| ||||||||| | || || ||||| Sbjct 1934454 GATACCATCGATAACGTCAAGTCAAAG-ATCCAGGATAAGGAAGGCATCCCCCCTGACCA 1934512 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || || || || || ||| | || || || || ||| || || Sbjct 1934513 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 1934572 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| ||||| ||||| ||||| || || || || Sbjct 1934573 CATCCAAAAGGAATCCACTCTGCACCTTGTCCT 1934605 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || || ||||| || ||||| | || || ||| | || Sbjct 1934622 ATGCAAATTTTTGTCAAGACACTCACTGGCAAGACCATCACGCTGGAAGTGGAATCATCT 1934681 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| |||| | | | ||| | ||||||||| || | || || ||||| Sbjct 1934682 GACACGATCGACAACGTTAAGAGCAAGA-TCCAGGACAAGGAGGGTATCCCCCCAGACCA 1934740 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || ||||| || || ||| |||| ||| Sbjct 1934741 GCAGCGTCTTATCTTCGCCGGTAAGCAGCTGGAGGAC 1934777 Score = 86.0 bits (94), Expect = 6e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 31215 TGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAAC 31274 |||| ||||| || ||||| | || ||||| | ||||||| |||| | ||||| Sbjct 1933960 TGACCGGCAAGACCATCACTCTTGAGGTTGAGTCTTCCGACACCATCGACAATGTCAAGT 1934019 Query 31275 AGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTGGCA 31334 | || ||| ||||||||| | || || ||||||||||| || || ||||| |||| Sbjct 1934020 CCAAGATTCAGGATAAGGAAGGCATTCCTCCTGACCAGCAGCGCCTGATTTTCGCAGGCA 1934079 Query 31335 AACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTCTTC 31394 | ||| | || || || ||||||| || |||||||| || || || || |||| Sbjct 1934080 AGCAGCTTGAGGATGGCCGTACCCTGAGCGACTACAACATTCAGAAGGAGTCCACCCTTC 1934139 Query 31395 ATCTGGTACT 31404 | || || || Sbjct 1934140 ACCTTGTCCT 1934149 >seq55 Length=3282825 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 31201 TTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGT 31260 |||||| ||||| ||||| || || || || ||| ||||||| || || ||||| | Sbjct 2334012 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCAT 2333953 Query 31261 CGAAACGGTCAA-ACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTC 31319 ||| | ||||| || ||| | ||||||||| ||| | || || ||||||||||| | Sbjct 2333952 CGACAACGTCAAGACCAAGA-TCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCC 2333894 Query 31320 TAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAA 31379 | || ||||| ||||| ||| | || || || ||||||| || ||||| || | Sbjct 2333893 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 2333834 Query 31380 A 31380 | Sbjct 2333833 A 2333833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766037814800