Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq56 138 1e-27
seq61 123 3e-23
>seq56
Length=3289960
Score = 138 bits (152), Expect = 1e-27
Identities = 726/1148 (63%), Gaps = 16/1148 (1%)
Strand=Plus/Minus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|||| ||| |||| || || || || ||||||| || | | || | || ||||||
Sbjct 1940643 GCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCA 1940584
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
||||| || || | |||||||| | || | || || ||||| ||||| ||
Sbjct 1940583 GTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 1940524
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
|||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | |
Sbjct 1940523 GCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATAC 1940464
Query 63123 CAGACGACTC-GAGCCTTTATTATA-----GATTTGTATCTCCTTTCTCTTTCGTATAGA 63176
|||| | || ||||||| || | | | |||||| ||| | | | | |
Sbjct 1940463 CAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTT-CTCGTACTTCTCG- 1940407
Query 63177 GTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGA 63236
|| | | | |||||||| || || | |||| | | | || || | ||
Sbjct 1940406 -TAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGG 1940350
Query 63237 CACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAA 63296
|| | | | ||| || |||| | ||| || || ||||| || ||||||||| ||||
Sbjct 1940349 CAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAG 1940290
Query 63297 AGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCG 63356
||||| || ||||| | | | | ||| || || || ||||| ||||||
Sbjct 1940289 AGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCG 1940230
Query 63357 AGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGT 63416
|||||| | | | ||| | ||||| || |||| ||| ||||| | | ||||| ||
Sbjct 1940229 AGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGC 1940170
Query 63417 TTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATA 63476
||||| || ||||| || | ||| | || |||||||| | || | | ||| |||| |
Sbjct 1940169 TTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACA 1940110
Query 63477 ATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTA 63536
||||| || || |||||||| || || ||| || ||||||| || |
Sbjct 1940109 ATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGA 1940050
Query 63537 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGTC 63595
| | ||| || || || || | || || || | || || || |||| |||||
Sbjct 1940049 ACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGTC 1939991
Query 63596 ATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 63655
||||| || || ||||| || || ||||| | || || || || | ||| |
Sbjct 1939990 GTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGG 1939931
Query 63656 ACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAG 63715
| | ||| | || || || | || || || ||||| || || | |||| || |
Sbjct 1939930 CTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACAT 1939871
Query 63716 TAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACG 63775
| | ||| |||||||| || || || ||| || || || || || || ||
Sbjct 1939870 CAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGCG 1939811
Query 63776 CATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTT 63835
||| | || |||||| || | || ||| || ||| || | | || ||
Sbjct 1939810 CATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAACG 1939751
Query 63836 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 63895
|||| || || ||||| || ||||||| ||||| || ||||| | ||| ||||
Sbjct 1939750 CTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGA 1939691
Query 63896 ATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATACT-TGAAATAATCGGAG 63954
|| |||| ||| | ||| |||| || | ||| || | | || || || ||||
Sbjct 1939690 GTTAAGCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGAG 1939632
Query 63955 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 64014
| | || ||||| || |||||||||| | | | || || || |||
Sbjct 1939631 CAGGCTTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATT 1939572
Query 64015 GtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAAT 64074
| |||||||| | |||||| || || || | ||| || | ||| || || ||||| || |
Sbjct 1939571 GCTTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGT 1939512
Query 64075 CCGGATGT 64082
|||| |||
Sbjct 1939511 CCGGGTGT 1939504
>seq61
Length=2613024
Score = 123 bits (136), Expect = 3e-23
Identities = 115/146 (79%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640
||| |||||||| ||| ||||||||||| | | ||| | |||||| || || |||||
Sbjct 818121 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 818062
Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700
|||||||| || |||||||| || ||||| || ||||| ||||| || || || |||||
Sbjct 818061 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 818002
Query 33701 GATTCCTTCTACTGCAGCAAAGGCAA 33726
||| || || || ||||| |||||||
Sbjct 818001 GATACCCTCGACAGCAGCGAAGGCAA 817976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817088273200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |