Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq56 141 1e-28 seq61 131 2e-25 >seq56 Length=3289960 Score = 141 bits (156), Expect = 1e-28 Identities = 726/1143 (64%), Gaps = 16/1143 (1%) Strand=Plus/Minus Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 ||| |||| || ||||| || ||||||| || | | || | || || |||||||| Sbjct 1940638 AGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCAGTGCA 1940579 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 ||||| | ||| ||||| | || | || || ||||| ||||| || ||||| Sbjct 1940578 CAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 1940519 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||| || || ||||| || ||||||| ||| |||| | || | ||| || | ||||| Sbjct 1940518 CTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGA- 1940460 Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTTTC--GTA-TTGT-GTATA 79853 | || ||||||| || | |||| | | ||| ||| ||| || | ||| | Sbjct 1940459 GCTTCTGAGCCTTAATGGT---CTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGA 1940403 Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913 | | |||||||| || || | ||||| | | |||| |||| || || | Sbjct 1940402 GAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAA 1940345 Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973 | | ||| || || | | ||| || || ||||| || ||||||||| |||| ||||| Sbjct 1940344 GAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGC 1940285 Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033 || ||||| | || | | || || || || ||||| ||||||||||| Sbjct 1940284 GTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAA 1940225 Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093 | | | | ||| | ||||| || |||| ||| ||||| | | || || || ||||| Sbjct 1940224 CTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTT 1940165 Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153 || ||||| || | ||| | || |||||||| | || | | ||| |||| |||||| Sbjct 1940164 ACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACC 1940105 Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213 |||||| | |||||||| || || ||| || ||||||| || || Sbjct 1940104 ATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATT 1940045 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGA 80272 | ||| || || || || | || || || | || || || |||| || || |||| Sbjct 1940044 CAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGTCGTAGA 1939986 Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332 | ||||| ||||| || | ||||| | || || || || | ||| | | Sbjct 1939985 TACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGG 1939926 Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392 ||| | || || || | || || || ||||| || || | |||| |||| | | Sbjct 1939925 GAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGT 1939866 Query 80393 TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTA 80452 ||| |||||||| || || || ||| || || || || || || ||||| | Sbjct 1939865 GGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGCGCATCA 1939806 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 || |||||| || | || | | || || || | | || || |||| Sbjct 1939805 GCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCA 1939746 Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572 || || ||||| || ||||||| ||||| || ||||| | ||| ||||||| | Sbjct 1939745 GGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTTAA 1939686 Query 80573 GTTTATCCTTATATTTGTTAACTACATCCATGGTGATACT-TGAAATAATCGGAGAATGT 80631 | | ||| | ||| |||| | | ||| ||| | | || || || |||| | | Sbjct 1939685 GCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGAGCAGGC 1939627 Query 80632 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 80691 || ||||| || |||||||||| | | | || || || ||| | ||| Sbjct 1939626 TTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATTGCTTT 1939567 Query 80692 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGA 80751 ||||| | |||||| || || || ||||| || | ||| || | ||||| || || || Sbjct 1939566 TTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGTCCGGG 1939507 Query 80752 TGT 80754 ||| Sbjct 1939506 TGT 1939504 >seq61 Length=2613024 Score = 131 bits (144), Expect = 2e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| |||||||| ||| ||||||||||| | | ||| ||||||||||| || ||||| Sbjct 818121 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 818062 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 |||||||| || |||||||| || ||||| || ||||| || || || ||||| ||||| Sbjct 818061 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 818002 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 ||| || || || || || |||||||| || Sbjct 818001 GATACCCTCGACAGCAGCGAAGGCAACCAG 817972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268216406600