Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq56 141 1e-28
seq61 131 2e-25
>seq56
Length=3289960
Score = 141 bits (156), Expect = 1e-28
Identities = 726/1143 (64%), Gaps = 16/1143 (1%)
Strand=Plus/Minus
Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679
||| |||| || ||||| || ||||||| || | | || | || || ||||||||
Sbjct 1940638 AGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCAGTGCA 1940579
Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739
||||| | ||| ||||| | || | || || ||||| ||||| || |||||
Sbjct 1940578 CAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATC 1940519
Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799
||| || || ||||| || ||||||| ||| |||| | || | ||| || | |||||
Sbjct 1940518 CTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGA- 1940460
Query 79800 GACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTTTC--GTA-TTGT-GTATA 79853
| || ||||||| || | |||| | | ||| ||| ||| || | ||| |
Sbjct 1940459 GCTTCTGAGCCTTAATGGT---CTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGA 1940403
Query 79854 TAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACAT 79913
| | |||||||| || || | ||||| | | |||| |||| || || |
Sbjct 1940402 GAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAA 1940345
Query 79914 CAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC 79973
| | ||| || || | | ||| || || ||||| || ||||||||| |||| |||||
Sbjct 1940344 GAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGC 1940285
Query 79974 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 80033
|| ||||| | || | | || || || || ||||| |||||||||||
Sbjct 1940284 GTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAA 1940225
Query 80034 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTT 80093
| | | | ||| | ||||| || |||| ||| ||||| | | || || || |||||
Sbjct 1940224 CTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTT 1940165
Query 80094 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 80153
|| ||||| || | ||| | || |||||||| | || | | ||| |||| ||||||
Sbjct 1940164 ACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACC 1940105
Query 80154 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGA 80213
|||||| | |||||||| || || ||| || ||||||| || ||
Sbjct 1940104 ATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATT 1940045
Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCATAGA 80272
| ||| || || || || | || || || | || || || |||| || || ||||
Sbjct 1940044 CAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGTCGTAGA 1939986
Query 80273 TGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 80332
| ||||| ||||| || | ||||| | || || || || | ||| | |
Sbjct 1939985 TACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGG 1939926
Query 80333 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGAT 80392
||| | || || || | || || || ||||| || || | |||| |||| | |
Sbjct 1939925 GAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGT 1939866
Query 80393 TGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTA 80452
||| |||||||| || || || ||| || || || || || || ||||| |
Sbjct 1939865 GGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGCGCATCA 1939806
Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512
|| |||||| || | || | | || || || | | || || ||||
Sbjct 1939805 GCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCA 1939746
Query 80513 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 80572
|| || ||||| || ||||||| ||||| || ||||| | ||| ||||||| |
Sbjct 1939745 GGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTTAA 1939686
Query 80573 GTTTATCCTTATATTTGTTAACTACATCCATGGTGATACT-TGAAATAATCGGAGAATGT 80631
| | ||| | ||| |||| | | ||| ||| | | || || || |||| | |
Sbjct 1939685 GCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGAGCAGGC 1939627
Query 80632 TTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttt 80691
|| ||||| || |||||||||| | | | || || || ||| | |||
Sbjct 1939626 TTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATTGCTTT 1939567
Query 80692 tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGA 80751
||||| | |||||| || || || ||||| || | ||| || | ||||| || || ||
Sbjct 1939566 TTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGTCCGGG 1939507
Query 80752 TGT 80754
|||
Sbjct 1939506 TGT 1939504
>seq61
Length=2613024
Score = 131 bits (144), Expect = 2e-25
Identities = 119/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| |||||||| ||| ||||||||||| | | ||| ||||||||||| || |||||
Sbjct 818121 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 818062
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||
Sbjct 818061 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 818002
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAG 50108
||| || || || || || |||||||| ||
Sbjct 818001 GATACCCTCGACAGCAGCGAAGGCAACCAG 817972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268216406600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |