Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq56 123 3e-23 >seq56 Length=3289960 Score = 123 bits (136), Expect = 3e-23 Identities = 722/1146 (63%), Gaps = 10/1146 (1%) Strand=Plus/Minus Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTC 71756 ||||| ||| |||| || ||||| || ||||||| || | | || | || || || Sbjct 1940644 GGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTC 1940585 Query 71757 AGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 71816 |||||| || || | || ||||| | || | || || ||||| ||||| || Sbjct 1940584 AGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCA 1940525 Query 71817 CGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 71876 |||||||| || || || || || ||||||| ||| |||| | || | ||| || | Sbjct 1940524 AGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATA 1940465 Query 71877 CCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTA-TTGT-GT 71933 ||||| | || ||||||| || | || | | || | ||||| || | || Sbjct 1940464 CCAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGT 1940406 Query 71934 ATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACA 71993 | | | | |||||||| || || | ||| | | |||| || || || || Sbjct 1940405 AGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCA 1940348 Query 71994 CATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 72053 | | | ||| || || | | | | || || ||||| || ||||||||| |||| || Sbjct 1940347 GAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAG 1940288 Query 72054 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 72113 ||| || ||||| | || | | || || || || ||||| |||||||| Sbjct 1940287 AGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAG 1940228 Query 72114 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTT 72173 |||| | | | ||| | ||||| || |||| ||| ||||| | | || || || || Sbjct 1940227 GAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTT 1940168 Query 72174 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 72233 ||| || ||||| || | ||| | || |||||||| | || | | ||| |||| ||| Sbjct 1940167 GTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAAT 1940108 Query 72234 ACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAAT 72293 ||||||||| | |||||||| || || ||| || ||||||| || | || Sbjct 1940107 ACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAAC 1940048 Query 72294 TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTATCAT 72352 | ||| || || || || | || || || | || || || |||| || || | Sbjct 1940047 ATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGTCGT 1939989 Query 72353 AGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGAC 72412 |||| ||||| || || || | ||||| | || || || || | ||| | Sbjct 1939988 AGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCT 1939929 Query 72413 GACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTA 72472 | ||| | || || || | || || || ||||| || || | |||| |||| | Sbjct 1939928 GGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCA 1939869 Query 72473 GATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCA 72532 | ||| |||||||| || || || ||| || || || || || || |||| Sbjct 1939868 AGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGCGCA 1939809 Query 72533 TTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTT 72592 | | || ||||| || | || | | || || || | | || || | Sbjct 1939808 TCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAACGCT 1939749 Query 72593 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAAT 72652 ||| || || ||||| || ||||||| ||||| || ||||| | ||| |||| | Sbjct 1939748 CCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGT 1939689 Query 72653 TGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATAATCGGAGAA 72711 | || | ||| | ||| |||| || | ||| ||| | | || || || |||| | Sbjct 1939688 TAAGCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGAGCA 1939630 Query 72712 TGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGt 72771 | || ||||| || |||||||||| | | | || || || ||| | Sbjct 1939629 GGCTTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATTGC 1939570 Query 72772 ttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831 |||||||| | |||||| || || || ||||| || | ||| || || ||||| || || Sbjct 1939569 TTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGTCC 1939510 Query 72832 GGATGT 72837 || ||| Sbjct 1939509 GGGTGT 1939504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138654699400