Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2 89.7 4e-13
>seq2
Length=3819764
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || |||| | | ||| || || || || |||||||| || || ||||| ||||
Sbjct 1934849 ACCACCACGCAGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGA 1934790
Query 48559 CAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCG 48617
|| || ||| |||||||||||||||||||| || | || | ||||||||| || |
Sbjct 1934789 -AAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGG 1934731
Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTC 48675
| | || ||||||||| || || ||| | | | || || || || | || ||
Sbjct 1934730 GGATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCG--ATCGTGTCAGATGATTC 1934673
Query 48676 CGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || | || ||||| || || ||||| || || |||||||| |||||
Sbjct 1934672 CACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 1934622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250866290065
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |