Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq46 165 1e-36 seq2 161 2e-35 >seq46 Length=704785 Score = 165 bits (182), Expect = 1e-36 Identities = 187/248 (75%), Gaps = 2/248 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||||| | || || ||||| || || ||||||||||| |||| Sbjct 567444 CGCCAAGCGTCACCGCAAGATCT-TGCGTGACAACATTCAGGGTATCACCAAGCCCGCTA 567386 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || ||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 567385 TTCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 567326 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 |||| ||| | |||| ||||||| || || |||| ||| || || ||| || | Sbjct 567325 CCCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTCACCTACACTG 567266 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || ||||||| || | || || || | Sbjct 567265 AGCACGCCAAGCGCAAGACCGTCACGTCTCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 567206 Query 16671 GCCGTAAG 16678 |||||||| Sbjct 567205 GCCGTAAG 567198 >seq2 Length=3819764 Score = 161 bits (178), Expect = 2e-35 Identities = 198/268 (74%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| ||| || || |||||||| || || |||||||| || || Sbjct 359319 GCCAAGCGCCACCGCAAGAT-TCTACGCGACAACATCCAGGGTATTACCAAGCCCGCCAT 359261 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| || || ||||| || ||||||||| |||| | || |||| || |||| Sbjct 359260 CCGCCGTCTCGCCCGCCGTGGCGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGAC 359201 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| |||||| || | || || | ||| ||| || ||| ||||| Sbjct 359200 CCGCGGTGTCCTCAAGACTTTCCTCGAGTCTGTCATTCGTGACGCTGTCACCTACACCGA 359141 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| |||||||| || ||||| | ||| | ||||| || | || || || || Sbjct 359140 GCACGCTAAGCGTAAGACCGTTACCTCGCTTGATGTTGTCTACGCTCTCAAGCGCCAGGG 359081 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| || ||||| Sbjct 359080 CCGTACCCTCTACGGTTTCGGTGGTTAA 359053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075140570045