Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq56 161 1e-34 seq61 138 1e-27 >seq56 Length=3289960 Score = 161 bits (178), Expect = 1e-34 Identities = 732/1149 (64%), Gaps = 16/1149 (1%) Strand=Plus/Minus Query 62891 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTC 62950 ||||| ||| |||| || ||||| || ||||||| || | | || | || ||||| Sbjct 1940644 GGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTC 1940585 Query 62951 AGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACA 63010 |||||| || || | |||||||| | || | || || ||||| ||||| || Sbjct 1940584 AGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCA 1940525 Query 63011 CGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT 63070 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | Sbjct 1940524 AGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATA 1940465 Query 63071 CCAGACGACTC-GAGCCTTTATTATA-----GATTTGTATCTCCTTTCTCTTTCGTATAG 63124 ||||| | || ||||||| || | | | |||||| ||| | | | | | Sbjct 1940464 CCAGA-GCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCCTT-CTCGTACTTCTCG 1940407 Query 63125 TGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGG 63184 | | | | | |||||||| || || | |||| | | |||| || | || Sbjct 1940406 T--AGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGG 1940351 Query 63185 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63244 || | | | ||| || |||| | ||| || || ||||| || ||||||||| |||| Sbjct 1940350 GCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCA 1940291 Query 63245 AAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATC 63304 ||||| || ||||| | || | | ||| || || || ||||| ||||| Sbjct 1940290 GAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATC 1940231 Query 63305 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCG 63364 ||||||| | | | ||| | ||||| || |||| ||| ||||| | | ||||| || Sbjct 1940230 GAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCG 1940171 Query 63365 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 63424 ||||| || ||||| || | ||| | || |||||||| | || | | ||| |||| Sbjct 1940170 CTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAAC 1940111 Query 63425 AATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACT 63484 |||||| || || |||||||| || || ||| || ||||||| || Sbjct 1940110 AATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTG 1940051 Query 63485 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAA-CGTGT 63543 || | ||| || || || || | || || || | || || || |||| |||| Sbjct 1940050 AACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACA-GGTCTTAAGAGTGT 1939992 Query 63544 CATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63603 | ||||||||||| ||||| || || ||||| | || || || || | ||| Sbjct 1939991 CGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGG 1939932 Query 63604 GACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 63663 | | ||| | || || || | || || || ||||| || || | |||| || | Sbjct 1939931 GCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACA 1939872 Query 63664 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63723 | | ||| |||||||| || || || ||| || || || || || || | Sbjct 1939871 TCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAGCAACGC 1939812 Query 63724 GCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATT 63783 |||| | || |||||| || | || | | || ||| || | | || || Sbjct 1939811 GCATCAGCAGGTGCTGGGGACGCTCGGCAACACTGCCGTTGATACGGAGAAGATATGAAC 1939752 Query 63784 TTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCG 63843 |||| || || ||||| || ||||||| ||||| || ||||| | ||| ||| Sbjct 1939751 GCTCCAGGGTCTTGAAACCGAAGAAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCG 1939692 Query 63844 AGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACT-TGAAATAATCGGA 63902 |||| || | ||| | ||| |||| || | ||| ||| | | || || || ||| Sbjct 1939691 AGTTAAGCTCATCGGCGTGTTTCATAACAATCT-CATAGTGCTGTTGAGAGATCATAGGA 1939633 Query 63903 GAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAAT 63962 | | | || ||||| || |||||||||| | | | || || || ||| Sbjct 1939632 GCAGGCTTATTGTTTTTGGGGTTAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAAT 1939573 Query 63963 AGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAA 64022 | |||||||| | |||||| || || || ||||| || | ||| || || ||||| || Sbjct 1939572 TGCTTTTTTGTCTGCTTGTGGAGGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAG 1939513 Query 64023 TCCGGATGT 64031 ||||| ||| Sbjct 1939512 TCCGGGTGT 1939504 >seq61 Length=2613024 Score = 138 bits (152), Expect = 1e-27 Identities = 118/146 (81%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| |||||||| ||| ||||||||||| | | ||| ||||||||||| || ||||| Sbjct 818121 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 818062 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 |||||||| || |||||||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct 818061 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 818002 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAA 33448 ||| || || || ||||| ||||||| Sbjct 818001 GATACCCTCGACAGCAGCGAAGGCAA 817976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946693855400