Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq61 154 1e-32 seq55 122 8e-23 seq2 104 2e-17 seq56 96.9 3e-15 seq12 95.1 1e-14 >seq61 Length=2613024 Score = 154 bits (170), Expect = 1e-32 Identities = 340/504 (67%), Gaps = 7/504 (1%) Strand=Plus/Plus Query 46098 CAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCG 46157 |||||| |||| ||||| || |||||||| || |||| ||||| ||| Sbjct 817911 CAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCGACCTTCGCTTCGCG 817970 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | |||| ||||| || ||| ||||| |||| || ||||| || ||| ||||||| Sbjct 817971 TCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTT 818030 Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | |||| || | || | | |||||||| || || || |||||| || || || | Sbjct 818031 CTGGCTCAAGAAGCGTGGTC-TGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTC 818089 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACA 46336 | |||||||| || || || || || || |||||| || | ||| | || || || Sbjct 818090 GTGACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTT---CTCTCACCTGAACCACC 818146 Query 46337 AGCTTGCGCCCGACACCGT-GCTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAG 46395 | || ||| | ||| | || ||| | ||||| || | || ||| ||||| Sbjct 818147 GCCCTGATCCCAAGGTCGTTGAAGA-CATCATTGTCGAGGCCGTTGGTATCGAGCAGGAG 818205 Query 46396 TTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGAC 46455 || | || | ||| || ||| || |||||| ||||||||||| || |||||| | Sbjct 818206 TTCCTCACTGACGCTCTTCCCTGTGGCCTGCTTGGCATGAACGCCAAGCTCATGTGCCAG 818265 Query 46456 TACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCAC 46515 |||||||||||||| || ||||| || |||||| ||| | | |||| | | || Sbjct 818266 TACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTACTACAAC 818325 Query 46516 GCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTC 46575 | ||| || || || || ||| | ||||||||||| ||||| || || || ||| Sbjct 818326 TCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTC 818385 Query 46576 GAAAAGCGCGTCGGCGAGTATAAG 46599 || ||||| ||||| || ||| || Sbjct 818386 GAGAAGCGTGTCGGTGACTATCAG 818409 >seq55 Length=3282825 Score = 122 bits (134), Expect = 8e-23 Identities = 136/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| |||||| ||||| ||||||||||| ||| ||| Sbjct 2333831 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2333890 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | ||||||||||| || || || || || ||||| ||| || ||||| | | Sbjct 2333891 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 2333950 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || ||| | ||||||| ||||| ||||| ||| ||||| || || || || |||| Sbjct 2333951 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 2334010 Query 131225 AA 131226 || Sbjct 2334011 AA 2334012 >seq2 Length=3819764 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | ||| | || |||||||| || |||||||| ||| Sbjct 1934392 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1934333 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || ||| |||| | |||||||||||| |||||| Sbjct 1934332 AGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1934273 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || || || ||||| | || | || |||| ||||| | Sbjct 1934272 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACT 1934213 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| || || |||||||| || ||||| Sbjct 1934212 TCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || | || | ||| |||||||| ||||||||||| |||||| Sbjct 1934164 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 1934105 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| ||||||||||||||| | || | ||||||||||| ||||| Sbjct 1934104 AGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 1934045 Query 131128 ATTCCTTCTTTGTC 131141 || ||||| || || Sbjct 1934044 ATGCCTTCCTTATC 1934031 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| || || | ||| |||||| || || ||||| || Sbjct 1934848 CCACCACGCAGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAA 1934789 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||||| |||||| |||||||| || ||| |||| | |||||||||||| || ||| Sbjct 1934788 AGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 1934729 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | || || | || || | Sbjct 1934728 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATCGTGTCAGATGATTCCACT 1934669 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || || || || || ||||| ||||| Sbjct 1934668 TCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCAT 1934622 >seq56 Length=3289960 Score = 96.9 bits (106), Expect = 3e-15 Identities = 591/941 (63%), Gaps = 24/941 (3%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| ||||| ||||||| ||||| || | || | ||| || ||| |||| Sbjct 1941210 TTGACGACCTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGC 1941151 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || ||||||| ||| ||||| ||| ||| | || ||||||||| || ||| Sbjct 1941150 TCGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCATGGGAGCGACC 1941091 Query 145178 A--ATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCC 145235 | | | || ||||| | || || ||| | |||| || | | |||| |||| Sbjct 1941090 AGCAGACTG--TTGCGGACACCAGTCTCGGCGATCTTGGCCTTCAGAGAAGCCCAGTCCC 1941033 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | || ||| || | |||||||||||||||||||| ||||||| | ||||| Sbjct 1941032 AGAGGTCAGTGGGAGTACGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGGG 1940973 Query 145296 TGCCTTGAAAGGAACTGTAACTGCCCCAAGTT--TTGGCGAGCTCGCAACTCGCCTCCAG 145353 ||| | ||| ||| | || || | ||||| || ||| | || ||| Sbjct 1940972 AGCCGGGGTAGGTCTCGTA--GGTACCGAGCTGCTTGGCCAGGTCGGAGGAGGCAGTCAG 1940915 Query 145354 AGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTC 145413 || ||| || || |||||| || || |||| ||| | | || || | || Sbjct 1940914 GGCACCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTGTCTTGCCTCGGGGGAGTC 1940855 Query 145414 GTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGG 145473 | | |||| ||||| | |||||||| || || || | | || | | | ||||| Sbjct 1940854 GAAGGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGGGCAATGGG 1940795 Query 145474 CCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAAT 145533 || || | ||||||| || | ||| || || || || |||||| || Sbjct 1940794 ACGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACGGGGTAGTAGTTGATGTCGATGAT 1940735 Query 145534 TTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCG 145593 || |||||||| || || | |||| || | | | || | ||||| | | Sbjct 1940734 CTTGTTCAAGTTGCGAACGAGAACCTGGACAACCTCGTGAAGTTTGCCGAAGTCGTA-CT 1940676 Query 145594 AGCCTC-GTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCG 145652 ||| | | || | | || | || | ||| | || ||||| || ||||| || Sbjct 1940675 CGCCACGGGCAGCATCAACGAAAGTAGGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGA 1940616 Query 145653 TCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTC 145712 ||| || | | ||||| | | |||||| | ||||| ||| | || |||| Sbjct 1940615 CCTCATCAGGAGCACTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTC 1940556 Query 145713 CCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGC 145772 |||| || | ||| || || ||| ||||||| || |||||||| |||||| | || | Sbjct 1940555 CCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTAC 1940496 Query 145773 CAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAGTCCTGCGC----ACGCACC 145825 ||||||| ||| | ||| | || | | | | || | ||| || | | | Sbjct 1940495 CAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGC---TTCTGAGCCTTAATGGTCT 1940439 Query 145826 TGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCG 145885 ||| || |||||||| | ||||| ||| |||||| |||| ||| | |||| Sbjct 1940438 TGC----GGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCG 1940383 Query 145886 TAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCG 145945 ||| ||| | || || | || |||||| || | || | ||| | ||||| || Sbjct 1940382 TAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCC 1940323 Query 145946 TTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 | || |||| ||| |||| ||| || ||| || ||||| Sbjct 1940322 TCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTA 1940282 >seq12 Length=2198207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/139 (76%), Gaps = 1/139 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | |||||||||||| || |||||||| || Sbjct 1200423 CCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1200364 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1200363 AGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 1200304 Query 131128 ATTCCTTCTTTGTC-GGTG 131145 || || || ||||| |||| Sbjct 1200303 ATACCCTCCTTGTCTGGTG 1200285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012416489600