Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq56 136 5e-27
seq61 120 4e-22
>seq56
Length=3289960
Score = 136 bits (150), Expect = 5e-27
Identities = 372/565 (66%), Gaps = 10/565 (2%)
Strand=Plus/Minus
Query 62747 GCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 62806
|||| ||| |||| || ||||| || ||||||| || | | || | || ||||||
Sbjct 1940643 GCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCA 1940584
Query 62807 GTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 62866
||||| || || | || ||||| | || | || || ||||| ||||| ||
Sbjct 1940583 GTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAA 1940524
Query 62867 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 62926
|||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | |
Sbjct 1940523 GCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATAC 1940464
Query 62927 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGT----G 62981
|||| | || ||||||| || | || | | ||| ||| || | |
Sbjct 1940463 CAGA-GCTTCTGAGCCTTAATGGTC--TTGCGGCCACGGCCCTCCTTCTCGTACTTCTCG 1940407
Query 62982 TATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGAC 63041
|| | | | |||||||| || || | |||| | || |||| || | || |
Sbjct 1940406 TAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGC 1940349
Query 63042 ACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAA 63101
| | | | ||| || |||| | ||| || || ||||| || ||||||||| |||| |
Sbjct 1940348 AGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGA 1940289
Query 63102 GAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 63161
|||| || ||||| | || | | ||| || || || ||||| |||||||
Sbjct 1940288 GAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGA 1940229
Query 63162 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTT 63221
||||| | | | ||| | ||||| || |||| ||| ||||| | | ||||| || |
Sbjct 1940228 GGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCT 1940169
Query 63222 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 63281
|||| || ||||| || | ||| | || |||||||| | || | | ||| |||| ||
Sbjct 1940168 TGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAA 1940109
Query 63282 TACCATTGGATGTACCATTGGTCCC 63306
|||||||||| | |||||||| ||
Sbjct 1940108 TACCATTGGAGGAGCCATTGGTTCC 1940084
>seq61
Length=2613024
Score = 120 bits (132), Expect = 4e-22
Identities = 114/146 (78%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719
||| |||||||| ||| ||||||||||| | | ||| | ||||||||| || |||||
Sbjct 818121 ACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAG 818062
Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779
|||||||| || |||||||| || ||||| || ||||| || || || ||||| |||||
Sbjct 818061 ACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAA 818002
Query 32780 AATTCCTTCTACTGCCGCAAAGGCAA 32805
|| || || || || || |||||||
Sbjct 818001 GATACCCTCGACAGCAGCGAAGGCAA 817976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631485174000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |