Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq61 167 5e-36
seq48 123 5e-23
>seq61
Length=2613024
Score = 167 bits (184), Expect = 5e-36
Identities = 298/426 (70%), Gaps = 12/426 (3%)
Strand=Plus/Minus
Query 251542 TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCC 251601
||||| ||| ||||| |||||||| || | |||||| |||| ||||| ||||
Sbjct 818408 TGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCC 818349
Query 251602 ATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATG 251661
||||||||||||||||| | | ||||| | ||| | |||||| || |||| ||
Sbjct 818348 ATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCCAAGGGCCACGAGGAGA 818289
Query 251662 CGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGA 251721
||||| || |||||||| | ||||| | ||| || | | ||||||||||| || | |
Sbjct 818288 CGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAGGCCA 818229
Query 251722 CAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAAT--TG 251779
|| |||| || ||| || ||| |||| ||| | |||| | |||| ||||| ||
Sbjct 818228 CAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGG---CCTCGACAATGATG 818172
Query 251780 CCTTCACCTGTGCCAGAGA-CA-GCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA 251836
||||| | | | | || || | || | ||| | ||| | ||||| | || ||
Sbjct 818171 TCTTCAAC-GACCTTGGGATCAGGGCGGTGGTTCAGGTGAGAGAAGAGGAGACAAGCGAA 818113
Query 251837 A-CTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGC 251895
| | || ||| ||||||||||| ||| |||| |||||||| | || || |||
Sbjct 818112 ATCAGT--GTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGC 818055
Query 251896 ATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCC 251955
|||| ||||| ||| ||||||||||||| | | ||||| |||||||| | | ||||
Sbjct 818054 ATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCC 817995
Query 251956 TCGACA 251961
||||||
Sbjct 817994 TCGACA 817989
>seq48
Length=3188669
Score = 123 bits (136), Expect = 5e-23
Identities = 160/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || ||||| ||||| || || || |||| ||||||||||| |||
Sbjct 904175 GGTGAGGATCTTTGCAACTGTACCTTCTCTCTGGCTTACGGTGCCAAGATTCTGCTGAAC 904116
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | ||| | ||||||||||| | || || |||||| | || ||||| || |
Sbjct 904115 CAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTGGGCCCCAACGGTTCC 904056
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
||||||| ||| || |||||||| || |||| ||||| || || || || ||
Sbjct 904055 GGTAAGACCACCCTCATGCGCGCTATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAAG 903996
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|||||| | ||| || || || ||||||||| |||||||
Sbjct 903995 GATGAGGTCAAGACCGTCTACGTCGAGCACGACCTCGACTC 903955
Score = 91.5 bits (100), Expect = 3e-13
Identities = 95/122 (78%), Gaps = 2/122 (2%)
Strand=Plus/Minus
Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760
||||||| || || |||||||| || || |||||| ||||| | ||| ||| ||
Sbjct 902770 CTCACTCCCGTATGCGCGGTCTCTCCGGTGGCCAGCGTGTCAAGGTCGTCCTCGCCGCTT 902711
Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820
|||| |||||| | || ||||| ||||| |||||||||||||||||||| || |||||
Sbjct 902710 GCTC-GTGGCAGCGTCCCCACGTCATCGTCCTCGACGAGCCTACCAACTACCTCGACCGT 902652
Query 280821 GA 280822
||
Sbjct 902651 GA 902650
Score = 89.7 bits (98), Expect = 1e-12
Identities = 132/185 (71%), Gaps = 3/185 (2%)
Strand=Plus/Minus
Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764
|| || |||||||||||||||||||| || || || ||| | | | | |||||
Sbjct 903809 CTCTCTGGTGGTTGGAAGATGAAGCTCGCTCTGTGCCGTGCCGTCTTCGAGAGCCCCGAT 903750
Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824
| || ||||| || ||||| ||||||||| ||||| || ||||| || ||||| | |
Sbjct 903749 ATTCTCCTGCTCGACGAGCCCACCAACCACTTGGACGTCAAGAACGTCGCATGGCTCGAG 903690
Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884
|||||| | |||| || ||||| |||| ||||| ||||||||| |||||
Sbjct 903689 AACTACCT--CAAGTCCTCCCCTTG-CACTTCCATCATGGTCTCCCACGACTCTCGCTTC 903633
Query 279885 CTAGA 279889
|| ||
Sbjct 903632 CTTGA 903628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835944004665
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |