Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 176 8e-39 seq55 132 9e-26 seq48 111 3e-19 seq61 86.0 1e-11 >seq2 Length=3819764 Score = 176 bits (194), Expect = 8e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || |||||||| || |||||||| || |||||| Sbjct 1934392 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1934333 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| |||||||| ||||| | || |||||||| || Sbjct 1934332 AGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 1934273 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | ||||||| ||||||||||| | || || ||| Sbjct 1934272 ATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACT 1934213 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| ||||| ||||||||||| ||||| || ||||| Sbjct 1934212 TCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || ||||||||||| || ||||| Sbjct 1934620 CCACCACGGAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCGGAC 1934561 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| ||||| || || || | ||| ||||| || || Sbjct 1934560 AGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGG 1934501 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||||| ||||||| |||||||| || | || ||||| Sbjct 1934500 ATGCCTTCCTTATCCTGGATCTTTGACTTGACGTTATCGATGGTATCCGACGACTCTACC 1934441 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| ||||| ||||||||||| ||||| || ||||| Sbjct 1934440 TCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 1934394 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || |||||||| || || ||||| || ||| Sbjct 1934164 CCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTC 1934105 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 1934104 AGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGA 1934045 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || |||||||| | |||||| ||||||||||| | || || || Sbjct 1934044 ATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACC 1933985 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | |||||||| || || || Sbjct 1933984 TCAAGAGTGATGGTCTTGCCGGT 1933962 >seq55 Length=3282825 Score = 132 bits (146), Expect = 9e-26 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 2333833 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2333892 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| || ||||| | ||||||| ||| Sbjct 2333893 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 2333952 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 2333953 ATGGTGTC-GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2334011 >seq48 Length=3188669 Score = 111 bits (122), Expect = 3e-19 Identities = 480/738 (65%), Gaps = 42/738 (6%) Strand=Plus/Plus Query 225280 ACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCTTCAGGTCGTA 225339 |||||| ||||| |||||||||||||||| ||| | | | | | || ||||| Sbjct 903465 ACCCTCAAGGAAACCGGGCTCGGGGAACTTGAACTCCATGTCTGAGGCACCGAGCTCGTA 903524 Query 225340 GTAAGATGCAGCCTCGGGTCGCT--TTGCCACGAAAGCAGACAGGTTTCCGAGGTG-CTT 225396 ||| || || |||| ||| ||| ||||| | || ||| | ||| ||| | Sbjct 903525 GTAGGACTTGGCAGCGGGGTGCTGCTTG--ACGAAGTCGGAGAGGGTACCGCGGTAACGG 903582 Query 225397 CGTGAGCTTGAGGTTCTTCTCGTAATGAACAA----TTGCCGAGCACACTGCGTCAAGGA 225452 || |||||||| | || |||| || |||| ||| || || || |||||||| Sbjct 903583 CG-GAGCTTGAAGCGCT---CGTAGTGGACAACGTGTTG--GATGACG-TG-GTCAAGGA 903634 Query 225453 AGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCTTGAGGTGCGTG 225511 ||| |||||||||||| || |||||||| | || | | ||| | ||||||| | Sbjct 903635 AGCGAGAGTCGTGGGAGACCATGATGGAAGTGCAAG---GGGAGGAC-TTGAGGTAGTTC 903690 Query 225512 ATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAGCAGGATG 225571 ||||||||| ||||| ||||||||| |||||| || || ||||| || || || || Sbjct 903691 TCGAGCCATGCGACGTTCTTGACGTCCAAGTGGTTGGTGGGCTCGTCGAGCAGGAGAATA 903750 Query 225572 TCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCCGGACAGG 225631 || | || || ||| || |||| |||||||| ||||| || || || ||| Sbjct 903751 TCGGGGCTCTCGAAGACGGCACGGCACAGAGCGAGCTTCATCTTCCAACCACCAGAGAGG 903810 Query 225632 GAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCC---AGGAGCGT---C 225685 | | ||| | | | ||| || || | |||||| |||| | |||| | | Sbjct 903811 GCGGTGATGGGACCGGAGATCTGAGAGGGCTGGAAGCCGAACTCGTTGACGAGCTTATCC 903870 Query 225686 TGGATAATGCGCT-CGGGAGAG--CTG--CGAGC--GGCAACGTTGGGGTCGGACGAGAG 225738 | || | | | |||||| | ||| | | | ||||| || | || | || Sbjct 903871 TCGAGC-TCCTCAACGGGAGGGTGCTGGCCAACCTCGGCAAGCTTCTTCTGGGTCCAG-- 903927 Query 225739 GTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCGT 225798 | ||| | ||||| || | | | | ||| | |||||| || ||||| || || Sbjct 903928 GCAATGA----CGGTCTGCTCGGTATCGGCAGAGTCGAGGTCGTGCTCGACGTAGACGGT 903983 Query 225799 CCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGCAG 225858 | || || | | |||||| ||||| ||||| | || || || || | || Sbjct 903984 CTTGACCTCATCCTTCTTGGGGAAACCCTCGAGCTGCTCGTTGTTGATAGCGCGCATGAG 904043 Query 225859 GGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATGTT 225918 ||| |||| || | |||||||| || | ||| |||||| | | || ||||||| | Sbjct 904044 GGTGGTCTTACCGGAACCGTTGGGGCCCAGGAGACCGTAACGCTGGCCACGCTTGAGGCG 904103 Query 225919 GAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCGCA 225978 ||| | || |||||| || |||||| |||| || || || ||||| || | ||| Sbjct 904104 CAGGTGAGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCCAGAGAGAAGGTACAGTTGCA 904163 Query 225979 CAGGTCCTCACCCTCCTC 225996 || |||||||||||||| Sbjct 904164 AAGATCCTCACCCTCCTC 904181 >seq61 Length=2613024 Score = 86.0 bits (94), Expect = 1e-11 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 10622 CAGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAA 10681 |||||| || | || || || ||| | | || |||||| | |||| ||| |||||| Sbjct 817681 CAGGTTTTCGTTGACGATACCGTCGGAGGCAGCGAAGAAGGCAAGGACGTGGGAGATGAA 817622 Query 10682 GTGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGAC 10741 || |||||||||||||| || | ||||||| | ||||| | || | | Sbjct 817621 GTAACGCTCATCATCGTTGAGGCGGTTGTGCCAGTCGTGGAGATCCTTGGATAGATCAAT 817562 Query 10742 CTCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 |||||| |||||||||||| ||| |||||||||||||||| || Sbjct 817561 CTCCTCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATTTG 817517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621651181800