Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 3e-15
>seq2
Length=3819764
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || || || || ||||||||||| |||
Sbjct 1934167 ATACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 1934108
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| ||||| ||| ||||| || || || ||| | || || ||||| ||||| |||
Sbjct 1934107 CTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGA 1934048
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| || || |||||| || | | || | |||||||| || ||
Sbjct 1934047 GGAATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCA 1933988
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360
|| || | || | || ||||||||||
Sbjct 1933987 ACCTCAAGAGTGATGGTCTTGCCGGTCA 1933960
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | ||| | || || || || || |||||||| |||
Sbjct 1934395 ATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1934336
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| ||| ||| ||||| || || || ||| ||||||||||||| ||||| |||
Sbjct 1934335 GAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGA 1934276
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || || || |||||| || | | || | |||||||| || ||
Sbjct 1934275 GGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCA 1934216
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | || || ||||| || || ||||| || || |||||
Sbjct 1934215 ACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420134067174780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |