Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 >seq2 Length=3819764 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || || || || ||||||||||| ||| Sbjct 1934167 ATACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 1934108 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| ||||| ||| ||||| || || || ||| | || || ||||| ||||| ||| Sbjct 1934107 CTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGA 1934048 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || |||||| || | | || | |||||||| || || Sbjct 1934047 GGAATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCA 1933988 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | || | || |||||||||| Sbjct 1933987 ACCTCAAGAGTGATGGTCTTGCCGGTCA 1933960 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | || || || || || |||||||| ||| Sbjct 1934395 ATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1934336 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| ||| ||||| || || || ||| ||||||||||||| ||||| ||| Sbjct 1934335 GAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGA 1934276 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || || || |||||| || | | || | |||||||| || || Sbjct 1934275 GGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCA 1934216 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || || ||||| || || ||||| || || ||||| Sbjct 1934215 ACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134067174780