Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq56 309 6e-79 seq61 242 7e-59 >seq56 Length=3289960 Score = 309 bits (342), Expect = 6e-79 Identities = 1113/1720 (65%), Gaps = 67/1720 (4%) Strand=Plus/Minus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| || || ||||||| |||| | || |||||||||||||||||| Sbjct 1941552 ACGGTGAACTGGATAGGAGCAGAGGCGGCCATGGTGCGCAAGTAGTACATGCCGGTCTTC 1941493 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || | |||| || || |||||||| || | ||| ||| || ||| Sbjct 1941492 AGACCCATCTTCCAGCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTGGGCT----- 1941438 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 ||| ||| || ||| ||||||||| |||||||| | ||| | || || Sbjct 1941437 ----CCTT---CAGGTGGATGTTCAGGGACTGGGACTGGTCGATGTAGGCACCGCGGTCG 1941385 Query 243917 GCGGCCATGGTGATGAGGTCCTTCTG--AGATATCTCATACGCCGTCTTGTAGATGGGCT 243974 |||||||| | || || ||| |||| || || ||| |||||||||| || || Sbjct 1941384 GCGGCCATCTGCAGGATGTTACGCTGGGAGATTTCCCAGACG--GTCTTGTAGAGGGCCT 1941327 Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034 ||| || |||| | ||||||||| || ||||| || | |||||| || Sbjct 1941326 TGATGTCGGCGGGAATGTTGGGGATGTTCTGGACGGAGCCGCCGTCGGCGATGATACGGT 1941267 Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---T 244091 | |||||| ||| ||||| || | | | || ||| |||| ||| | | Sbjct 1941266 TCTTCATGTTGTCGGACCACAAACCGAGGTCGACAAGGTCCTT---CAGGAGCCAGGGGT 1941210 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 | || ||||| ||||| || | ||| || ||||| ||||| ||| | || |||| Sbjct 1941209 TGACGACCTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCT 1941150 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| || ||| || ||| || ||||| || ||||| |||||||| | |||| Sbjct 1941149 CGAAGCACTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCATGGGAGCGACCA 1941090 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 |||||||||| | || || ||| | ||| ||| || | | || | || Sbjct 1941089 GCAGACTGTTGCGGACACCAG---TCTCG--GCGA--TCTTGGC-CTTCAGAGAAGCCCA 1941038 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331 ||| ||||||| | | | || |||||||||| ||||||| | |||| || Sbjct 1941037 GTCCC-AGAGGTCAGTGGGAGTACGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGA 1940979 Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC-G 244390 ||||| ||| ||||||| ||||| |||| ||| |||||| | || | | Sbjct 1940978 CGGGGGAGCCGGGGTAGGTCTCGTAGGTACCGAGCTGCTTGGCCAGGTCGGAGGAGGCAG 1940919 Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450 || ||||| ||| |||||| |||||||||||| |||||| | | |||| | | Sbjct 1940918 TC-AGGGCACCGTGGTAGATAGTCTCGAAGATCTGGATGTTCAGCTGTCTTGCCTCGGGG 1940860 Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510 || |||||| | | || || ||| | || || || || | || |||| | | Sbjct 1940859 GAGTCGAAGGGCAGACGCAGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCGAGGGCA 1940800 Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570 ||||| | ||| || |||| | |||| ||||| |||||||| ||||| |||| Sbjct 1940799 ATGGGACGGTGACGGAAGTTGCTCTTCTTGGCCTCGGGGACGGGGTAGTAGTTGATGTCG 1940740 Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCA-GCTGAAAGTC 244629 || | |||||| | |||||| || | |||| || ||| || || ||| ||| Sbjct 1940739 ATGATCTTGTTCAAGTTGCGAACGAGAACCTGGACAACCTCGTGAAGTTTGCCGAA-GTC 1940681 Query 244630 GTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGC 244689 ||||||| || ||| | | | | ||| | | ||||| | || Sbjct 1940680 GTACTCG-------CCACGGGCAGCATCAACG----AAAGTAGGA-AGGGCAAGAGAAGC 1940633 Query 244690 CAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTT 244749 || |||||| || || ||||| || | |||||| || ||||| ||||| ||||| Sbjct 1940632 CAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATGATCTCAGTGCACAGGTT 1940573 Query 244750 ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTA 244809 || || || ||||||| || || ||| ||| |||||| || |||||||| Sbjct 1940572 GGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTA 1940513 Query 244810 GAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCT 244869 ||||||||||| || ||||| |||||| | || | | | |||||| | | Sbjct 1940512 CAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTG 1940453 Query 244870 AGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAA 244929 |||||| | ||| |||| | |||||| |||||| ||| || |||||||| Sbjct 1940452 AGCCTTAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCCTCGAA 1940393 Query 244930 CTCGGGGCCCCAGACCTCGTCTAGGCC--GGGGCACGACGCCGGGCACATGAGACTCCAC 244987 ||| || |||| || | || || || | || | ||||| | |||| |||| Sbjct 1940392 CTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTTG--GGGCAGAAGAGAGTCCAG 1940335 Query 244988 TCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGG 245047 || ||| ||| || | || |||||| || || || ||||||| || | |||||| Sbjct 1940334 TCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGA 1940275 Query 245048 TCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACG 245107 |||| || | || ||| || |||||| | || || | || || ||||| Sbjct 1940274 TCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACA 1940215 Query 245108 TCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGG 245167 || ||||||||||||||| ||||| || | || || || |||||||| || |||||| Sbjct 1940214 TCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTTACCACCCTGG 1940155 Query 245168 TCCACCATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGA 245223 | || | | || || | | ||||| | || || |||| || || || || || Sbjct 1940154 T----CAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGA 1940099 Query 245224 GTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT--- 245280 | ||| ||||| || ||||||| || || | | || ||| | || |||| Sbjct 1940098 GGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCAC---GGATGC-GGTGAACATTCA 1940043 Query 245281 -GCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGC 245339 || | || || ||| |||||| || | || ||| |||| | ||||| || | Sbjct 1940042 AACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATAC 1939983 Query 245340 CCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGC 245399 |||| |||||||| | ||||| || ||| ||||| || | |||||||||| ||| Sbjct 1939982 CCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAG 1939923 Query 245400 TGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 || | |||||| ||||||||| ||||||||| ||||| Sbjct 1939922 TGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTA 1939883 >seq61 Length=2613024 Score = 242 bits (268), Expect = 7e-59 Identities = 329/448 (73%), Gaps = 17/448 (4%) Strand=Plus/Plus Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764 ||||| ||||| | || |||||||| ||||||||||| || ||||||||||||||||| Sbjct 817972 CTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCATCTTC 818031 Query 42765 TGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823 ||||||||| || | ||| ||||||||| ||||||||||| ||||||||||| | Sbjct 818032 TGGCTCAAGAAGCGTG-GTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTCTCG 818090 Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883 |||||||| || || | || || || || ||||| ||||| ||||| | ||| Sbjct 818091 TGACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTCT---CACCTGAACCACC- 818146 Query 42884 GCCCT----CGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGG 42939 ||||| | |||| || | |||||| |||||||| | |||||| ||| Sbjct 818147 GCCCTGATCCCAAGGTC---GTTGAAGACATCATTGTCGAGGCCGTTGGTATCGAGCAGG 818203 Query 42940 AGTTCCTCACGCAGTCGCTGCCCGTGTC-CCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||||||| | | || ||| ||| |||| | ||||||||| | | ||||||||| Sbjct 818204 AGTTCCTCACTGACGCTCTTCCC-TGTGGCCTGCTTGGCATGAACGCCAAGCTCATGTGC 818262 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTA 43057 |||||||| ||| ||||| |||| |||||| ||| | ||| || | ||| Sbjct 818263 CAGTACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCAACAAGAAGTA-CTA 818321 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | | |||||||||||| |||||| |||||| ||| |||||||||||||| Sbjct 818322 CAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTT 818381 Query 43118 TTTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||||| |||| ||||| ||| Sbjct 818382 CTTCGAGAAGCGTGTCGGTGACTATCAG 818409 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338432724400