Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq2 111 2e-19
>seq2
Length=3819764
Score = 111 bits (122), Expect = 2e-19
Identities = 145/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| ||||| ||||| |||||||| || | | |||||| | || ||||||||||| |||
Sbjct 1934590 GTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCG 1934531
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || || || |||||||| || || || ||||| || || || || ||| |||
Sbjct 1934530 GCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTG 1934471
Query 64367 ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424
|| || | ||||| || || || || || | ||| | |||||| ||||| | |
Sbjct 1934470 ACGTTATCGATGGTATC--CGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGG 1934413
Query 64425 TTTTTACGAAAATTTGCAT 64443
| || ||||||||||||||
Sbjct 1934412 TCTTCACGAAAATTTGCAT 1934394
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || || || || |||||||| || | || ||||| | ||
Sbjct 1934377 AGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCC 1934318
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| ||||| | ||||| ||||||||||||||||| || || || || ||
Sbjct 1934317 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCC 1934258
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | || || | || ||||| | ||| | ||||
Sbjct 1934257 TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTC 1934198
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | || |||||||| ||||||||
Sbjct 1934197 TTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166
Score = 95.1 bits (104), Expect = 1e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || || |||| || || || || ||||||||||| || | ||| || | ||
Sbjct 1934149 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCC 1934090
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| || |||| || ||||||||||| |||||||| ||||| || ||
Sbjct 1934089 TCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 1934030
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | || || || | ||| | ||||
Sbjct 1934029 TGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTC 1933970
Query 64412 TTGCCGGTCA 64421
||||||||||
Sbjct 1933969 TTGCCGGTCA 1933960
Score = 87.8 bits (96), Expect = 2e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || || ||||| || | | ||||||| |||| || |||||||| ||||| |
Sbjct 1934812 TCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAG 1934753
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || ||||||||||| || || || || || || || || || || ||| ||
Sbjct 1934752 ATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTG 1934693
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || ||| | |||||||| | || | ||||||||| || | || || ||
Sbjct 1934692 TCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACA 1934633
Query 64433 AAAATTTGCAT 64443
|||||||||||
Sbjct 1934632 AAAATTTGCAT 1934622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644394038600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |