Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2 111 2e-19 >seq2 Length=3819764 Score = 111 bits (122), Expect = 2e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| ||||| |||||||| || | | |||||| | || ||||||||||| ||| Sbjct 1934590 GTGGATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCG 1934531 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || || |||||||| || || || ||||| || || || || ||| ||| Sbjct 1934530 GCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTG 1934471 Query 64367 ACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGGTCTTGCCGGTCAAAG 64424 || || | ||||| || || || || || | ||| | |||||| ||||| | | Sbjct 1934470 ACGTTATCGATGGTATC--CGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGG 1934413 Query 64425 TTTTTACGAAAATTTGCAT 64443 | || |||||||||||||| Sbjct 1934412 TCTTCACGAAAATTTGCAT 1934394 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || || || || || |||||||| || | || ||||| | || Sbjct 1934377 AGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCC 1934318 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| ||||| | ||||| ||||||||||||||||| || || || || || Sbjct 1934317 TCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCC 1934258 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | || || | || ||||| | ||| | |||| Sbjct 1934257 TGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTC 1934198 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| | || |||||||| |||||||| Sbjct 1934197 TTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166 Score = 95.1 bits (104), Expect = 1e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || || || || ||||||||||| || | ||| || | || Sbjct 1934149 AGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCC 1934090 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 |||||||||||||| || |||| || ||||||||||| |||||||| ||||| || || Sbjct 1934089 TCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATCC 1934030 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| || | || || | || || || | ||| | |||| Sbjct 1934029 TGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTC 1933970 Query 64412 TTGCCGGTCA 64421 |||||||||| Sbjct 1933969 TTGCCGGTCA 1933960 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || || ||||| || | | ||||||| |||| || |||||||| ||||| | Sbjct 1934812 TCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAG 1934753 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||||||||| || || || || || || || || || || ||| || Sbjct 1934752 ATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTG 1934693 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || ||| | |||||||| | || | ||||||||| || | || || || Sbjct 1934692 TCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACA 1934633 Query 64433 AAAATTTGCAT 64443 ||||||||||| Sbjct 1934632 AAAATTTGCAT 1934622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644394038600