Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq61 131 2e-25
seq55 93.3 4e-14
seq2 89.7 5e-13
>seq61
Length=2613024
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
||||| || | |||||| ||||||| | || | ||| || || | ||||| |||
Sbjct 818182 GAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCCTGCTTGGC 818241
Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733
|||||||| || ||||||| |||||||||||||||| || || ||||| | |||
Sbjct 818242 ATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCC 818301
Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792
|| |||| | | ||||||| |||| || ||| || || || || ||| | ||| ||
Sbjct 818302 CT-TGGCAACAAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTC 818360
Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841
|| | |||||||||||||| ||||||||||| ||||| || ||| ||
Sbjct 818361 CCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAG 818409
>seq55
Length=3282825
Score = 93.3 bits (102), Expect = 4e-14
Identities = 133/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 2333831 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2333890
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| || ||||| ||||| || || || || || ||||| || | || || || | |||
Sbjct 2333891 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 2333949
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 2333950 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 2334008
Query 138603 AAAA 138606
|||
Sbjct 2334009 GAAA 2334012
>seq2
Length=3819764
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|| |||||||| |||||||||||| || || || ||||| || || ||||||| |
Sbjct 1934587 GATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCA 1934528
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| ||||| || ||||| || || || ||||| || || ||| ||| || |
Sbjct 1934527 AAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACG 1934468
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | ||| || | |||||| ||||| | || | || || || || || || ||
Sbjct 1934467 TTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTC 1934408
Query 138601 ACAAAAATCTGCAT 138614
|| ||||| |||||
Sbjct 1934407 ACGAAAATTTGCAT 1934394
Score = 87.8 bits (96), Expect = 2e-12
Identities = 139/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | ||| || ||||| || || || ||||
Sbjct 1934359 GACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCG 1934300
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539
|||| |||||||| ||||| ||||| ||||| || || || ||| | || | || |
Sbjct 1934299 AAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATC-CTGAATCTTGGACTTGAC 1934241
Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598
||| || | |||||||| ||||| || || | || | || || || || || || |
Sbjct 1934240 GTTG-TCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCT 1934182
Query 138599 TTACAAAAATCTGCAT 138614
|||| || || |||||
Sbjct 1934181 TTACGAAGATTTGCAT 1934166
Score = 84.2 bits (92), Expect = 2e-11
Identities = 125/174 (72%), Gaps = 4/174 (2%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||||||||||| ||||| ||||| || || || || |
Sbjct 1934131 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCG 1934072
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTA 138538
| || || ||||| ||||| ||||| || ||||| || || ||| | || | ||
Sbjct 1934071 AAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC-CTGAATCTTGGACTTGAC 1934013
Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCA 138592
|||| || | |||||||| ||||| ||||| | || | || || || ||||
Sbjct 1934012 ATTG-TCGATGGTGTCGGAAGACTCAACCTCAAGAGTGATGGTCTTGCCGGTCA 1933960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261996786800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |