Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
>seq2
Length=3819764
Score = 107 bits (118), Expect = 2e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || ||||| || || || ||||| ||||| || || |||
Sbjct 1934395 ATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1934336
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || | ||| || | || ||||| ||| | || | || |||||||| ||
Sbjct 1934335 GAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGA 1934276
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || ||||| ||||| || |||| || | || | |||||||||||||||
Sbjct 1934275 GGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTC 1934217
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | || || ||||| || || ||||| || ||||||||
Sbjct 1934216 AACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || || ||||| || |||||||||||||| || || |||
Sbjct 1934623 ATACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCG 1934564
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| || | || || || || | || | ||||||||||| ||
Sbjct 1934563 GACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGG 1934504
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| |||||||| ||||| || || ||| |||| || | || | ||| || || |||||
Sbjct 1934503 GGGATGCCTTCCTTATCCTGGATCTTTGACTTGA-CGTTATCGATGGTATCCGACGACTC 1934445
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | || || ||||| || || || || |||||||||||
Sbjct 1934444 TACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 1934394
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || ||||| | | || || || || || || ||||| || || || || |||
Sbjct 1934167 ATACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 1934108
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | ||| ||| || | || || |||||| | |||| || |||||||| ||
Sbjct 1934107 CTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGA 1934048
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| ||||| ||||| || |||| || | |||||||||||||||
Sbjct 1934047 GGAATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCA 1933988
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| || ||||| | || ||||||||
Sbjct 1933987 ACCTCAAGAGTGATGGTCTTGCCGGT 1933962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002832747400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |