Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 >seq2 Length=3819764 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || || ||||| ||||| || || ||| Sbjct 1934395 ATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCG 1934336 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || || | ||| || | || ||||| ||| | || | || |||||||| || Sbjct 1934335 GAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGA 1934276 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || || ||||| ||||| || |||| || | || | ||||||||||||||| Sbjct 1934275 GGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTC 1934217 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | || || ||||| || || ||||| || |||||||| Sbjct 1934216 AACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || ||||| || |||||||||||||| || || ||| Sbjct 1934623 ATACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGGATGTTGTAGTCG 1934564 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| || | || || || || | || | ||||||||||| || Sbjct 1934563 GACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGG 1934504 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || |||||||| ||||| || || ||| |||| || | || | ||| || || ||||| Sbjct 1934503 GGGATGCCTTCCTTATCCTGGATCTTTGACTTGA-CGTTATCGATGGTATCCGACGACTC 1934445 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || ||||| | || || ||||| || || || || ||||||||||| Sbjct 1934444 TACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCAT 1934394 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || || || || ||||| || || || || ||| Sbjct 1934167 ATACCACCACGGAGGCGGAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 1934108 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| ||| || | || || |||||| | |||| || |||||||| || Sbjct 1934107 CTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCAGGA 1934048 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| ||||| ||||| || |||| || | ||||||||||||||| Sbjct 1934047 GGAATGCCTTCCTTATCCTGAATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCA 1933988 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGT 45316 || || ||||| | || |||||||| Sbjct 1933987 ACCTCAAGAGTGATGGTCTTGCCGGT 1933962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002832747400