Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq56 154 2e-32 >seq56 Length=3289960 Score = 154 bits (170), Expect = 2e-32 Identities = 456/688 (66%), Gaps = 14/688 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACATGC 203897 || ||| || |||||||| || | | || | |||| || | | || |||||||||| Sbjct 1941559 CTGGTCGACGGTGAACTGGATAG-GAGCAGAGGCGGCCATGGTGCGCAAGTAGTACATGC 1941501 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || ||| ||| ||| ||| | ||||||||| | | |||| || | ||| Sbjct 1941500 CGGTCTTCAGACCCATCTTCCAGCCGGCGAAGTGCATGGAGGTGATCTTGCCCATGGTGG 1941441 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 | || || ||| |||||||| |||||| ||||||||| | ||| || || || ||| Sbjct 1941440 GCTCCTTCAGGTGGATGTTCAGGGACTGGGACTGGTCGATGTA-GGCACCGCGGTCGGCG 1941382 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | | ||| | ||| || || ||||| || |||||| | | | | || || Sbjct 1941381 GCCATCTGCAGGATGTTACGCTGGGAGATTTCCCAGACGGTCTTGTAGAGGGCCTTGATG 1941322 Query 204077 TGTTGAGGCACATCTTCCC-ACGTCCTGATCG-AGCCGTTGTCGGCCATCAGTCTCATCC 204134 | | || | || || | || ||| || ||||| |||||| || | | || Sbjct 1941321 TCG-GCGGGA-ATGTTGGGGATGTTCTGGACGGAGCCGCCGTCGGCGATGATACGGTTCT 1941264 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194 || | | || ||||| || | || || ||| || || |||||||| || Sbjct 1941263 TCATGTTGTCGGACCACAAACCGAGGTCGACAAGGTCCTTCAGGAGCCAGGGGTTGACGA 1941204 Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254 ||| || || |||| ||| || | |||| | | | ||| |||| | || ||||| Sbjct 1941203 CCTGGAACTCACCGGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCTCGAAGC 1941144 Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314 ||||||| ||||| |||||| ||| ||| |||||||||||||| | ||||| Sbjct 1941143 ACTCGTTGAAGCCGAGGATCTGACTGGTAGAGGCAGTGGGCATGGGAGCGACCAGCAGAC 1941084 Query 204315 AGTTGCGCACACCGTATTTTTG--GACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372 |||||| ||||| | | | | || | || ||||||||| | |||||| | | Sbjct 1941083 TGTTGCGGACACC--AGTCTCGGCGATCTTGGCCTTCAGAGAAGCCCAGTCCCAGAGGTC 1941026 Query 204373 ACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTT 204432 | |||| | | ||||||||||| |||| | |||||| || ||| ||| ||| Sbjct 1941025 AGTGGGAGTACGGTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACGGGGGAGCCGGG 1940966 Query 204433 GTACGTCGGATAAG-GCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||| ||| || | | || | ||| ||||| | | | ||||| | || ||| | Sbjct 1940965 GTAGGTCTCGTAGGTACCGAGCTGCTT-GGCCAGGTCGGAGGAGGCAGTCAGGGCACCGT 1940907 Query 204492 AGTACATGGTCTCAAAGATCTGAACGTT 204519 ||| || ||||| |||||||| | ||| Sbjct 1940906 GGTAGATAGTCTCGAAGATCTGGATGTT 1940879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154553936400