Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq61 161 1e-34 seq55 127 2e-24 seq2 113 5e-20 seq12 82.4 8e-11 >seq61 Length=2613024 Score = 161 bits (178), Expect = 1e-34 Identities = 185/248 (75%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254 || ||||| | ||||||||| ||| || || ||||| ||||| || |||||| | | Sbjct 817767 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGGAATC 817708 Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314 || || ||| ||||||||||||||| |||||||||||||| |||||| ||| ||| Sbjct 817707 TGGACCTCTCCGCTGAAACGCTCGACCAGGTTTTCGTTGACGATACCGTCGGAGGCAGCG 817648 Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAG 133371 || ||||| || ||||| |||||| | ||||| | ||||| | ||| | |||| Sbjct 817647 AAGAAGGCAAGGACGTGGGAGATGAAGTAACGCTCATCATCGTTGAGGCGGTTGTGCCAG 817588 Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431 ||| | |||||||| || || | |||||| ||||||| || || |||||||| || Sbjct 817587 TCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAGAAAGAGGCCTCGGCCTTC 817528 Query 133432 TTGTACAT 133439 |||||||| Sbjct 817527 TTGTACAT 817520 Score = 147 bits (162), Expect = 2e-30 Identities = 345/513 (67%), Gaps = 6/513 (1%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||| || ||| || ||||| || || || ||||| || || || || || || | Sbjct 818424 CATGACACCAGCCTTCTGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 818365 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || ||| ||| | ||| || || ||||||||||| | |||||||| ||| || | Sbjct 818364 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCC 818305 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAAT 132769 ||| | ||||| || | ||| || || ||||||||||| || ||||| | || || | Sbjct 818304 AAGGGCCACGAGGAGACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTT 818245 Query 132770 TAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | || ||||| | ||| || | | || || ||||| || |||||||| | || Sbjct 818244 CATG-CCAAGCAGGC-CACAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACG 818187 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTC-GGCCGTTGCACCAAATGCTTGAA 132887 || ||| | ||| || |||| | | | || || || || || || ||| Sbjct 818186 GCCTCGACAATGATGTCTTCAACGACCTTGG-GATCAGGGCGGTGGTTCAGGTGAGAGAA 818128 Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947 | | ||||| || || || | |||||||| | ||||||||||||||| ||| Sbjct 818127 GAGGAGACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAA 818068 Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007 || | |||||||| || || || || |||||||| || |||| |||||| || || Sbjct 818067 GGTGAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGA 818008 Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067 ||||||| |||||||| || ||||| || ||||| ||| |||| || | || | Sbjct 818007 GAAGAAGATACCCTCGACAGCAGCGAAGGCAACCAGACGCGAAGCGAAGGTCGACTCAGT 817948 Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100 | |||||| || | ||||| |||||||| Sbjct 817947 GTCATTGATCCAACGGATGGCCCACTCGGCCTT 817915 >seq55 Length=3282825 Score = 127 bits (140), Expect = 2e-24 Identities = 140/183 (77%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| ||||||||||| | | ||||| | | Sbjct 2334011 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2333952 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 2333951 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCC 2333894 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| | Sbjct 2333893 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 2333834 Query 38431 AGG 38433 ||| Sbjct 2333833 AGG 2333831 >seq2 Length=3819764 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| |||||||| || ||||| || || |||||||| | || || ||| | || Sbjct 1934166 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 1934225 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || || || | || || ||||| || || ||||||| Sbjct 1934226 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 1934284 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || || | ||||| ||| ||||||||| Sbjct 1934285 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAA 1934344 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || || ||| | || || || Sbjct 1934345 CATCCAGAAGGAGTCCACTCTCCATCTCGTCCTCCG 1934380 Score = 100 bits (110), Expect = 3e-16 Identities = 154/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || |||||||| | || || ||| | | Sbjct 1934394 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 1934453 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || ||| |||| || || || || || ||| | ||||| Sbjct 1934454 GATACCATCGATAACG-TCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 1934512 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | || || || ||||| || || | |||||||| ||||||||| Sbjct 1934513 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 1934572 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||||||| | || ||||| | || || ||| Sbjct 1934573 CATCCAAAAGGAATCCACTCTGCACCTTGTCCTCCGT 1934609 >seq12 Length=2198207 Score = 82.4 bits (90), Expect = 8e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| || Sbjct 1200290 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1200349 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||| ||||| || |||||||||||||| ||||| |||| || || Sbjct 1200350 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 1200399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172393609600