Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq61 161 1e-34
seq55 127 2e-24
seq2 113 5e-20
seq12 82.4 8e-11
>seq61
Length=2613024
Score = 161 bits (178), Expect = 1e-34
Identities = 185/248 (75%), Gaps = 3/248 (1%)
Strand=Plus/Minus
Query 133195 TCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACC 133254
|| ||||| | ||||||||| ||| || || ||||| ||||| || |||||| | |
Sbjct 817767 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGGAATC 817708
Query 133255 TGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCG 133314
|| || ||| ||||||||||||||| |||||||||||||| |||||| ||| |||
Sbjct 817707 TGGACCTCTCCGCTGAAACGCTCGACCAGGTTTTCGTTGACGATACCGTCGGAGGCAGCG 817648
Query 133315 AAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAG 133371
|| ||||| || ||||| |||||| | ||||| | ||||| | ||| | ||||
Sbjct 817647 AAGAAGGCAAGGACGTGGGAGATGAAGTAACGCTCATCATCGTTGAGGCGGTTGTGCCAG 817588
Query 133372 TCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTT 133431
||| | |||||||| || || | |||||| ||||||| || || |||||||| ||
Sbjct 817587 TCGTGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAGAAAGAGGCCTCGGCCTTC 817528
Query 133432 TTGTACAT 133439
||||||||
Sbjct 817527 TTGTACAT 817520
Score = 147 bits (162), Expect = 2e-30
Identities = 345/513 (67%), Gaps = 6/513 (1%)
Strand=Plus/Minus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| || ||||| || || || ||||| || || || || || || |
Sbjct 818424 CATGACACCAGCCTTCTGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 818365
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710
|| ||| ||| | ||| || || ||||||||||| | |||||||| ||| || |
Sbjct 818364 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCC 818305
Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAAT 132769
||| | ||||| || | ||| || || ||||||||||| || ||||| | || || |
Sbjct 818304 AAGGGCCACGAGGAGACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTT 818245
Query 132770 TAAGTCCCAGCAGACGCACCGGCA-GCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828
| | || ||||| | ||| || | | || || ||||| || |||||||| | ||
Sbjct 818244 CATG-CCAAGCAGGC-CACAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACG 818187
Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTC-GGCCGTTGCACCAAATGCTTGAA 132887
|| ||| | ||| || |||| | | | || || || || || || |||
Sbjct 818186 GCCTCGACAATGATGTCTTCAACGACCTTGG-GATCAGGGCGGTGGTTCAGGTGAGAGAA 818128
Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947
| | ||||| || || || | |||||||| | ||||||||||||||| |||
Sbjct 818127 GAGGAGACAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAA 818068
Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007
|| | |||||||| || || || || |||||||| || |||| |||||| || ||
Sbjct 818067 GGTGAGACCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGA 818008
Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067
||||||| |||||||| || ||||| || ||||| ||| |||| || | || |
Sbjct 818007 GAAGAAGATACCCTCGACAGCAGCGAAGGCAACCAGACGCGAAGCGAAGGTCGACTCAGT 817948
Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTT 133100
| |||||| || | ||||| ||||||||
Sbjct 817947 GTCATTGATCCAACGGATGGCCCACTCGGCCTT 817915
>seq55
Length=3282825
Score = 127 bits (140), Expect = 2e-24
Identities = 140/183 (77%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || ||||| || ||||| ||| ||||||||||| | | ||||| | |
Sbjct 2334011 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 2333952
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| |||| | |||| || |||| ||||| ||||| |||||| | ||||| ||||| |
Sbjct 2333951 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAGCAGCGCC 2333894
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| |
Sbjct 2333893 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 2333834
Query 38431 AGG 38433
|||
Sbjct 2333833 AGG 2333831
>seq2
Length=3819764
Score = 113 bits (124), Expect = 5e-20
Identities = 156/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| |||||||| || ||||| || || |||||||| | || || ||| | ||
Sbjct 1934166 ATGCAAATCTTCGTAAAGACCCTCACCGGAAAGACCATCACTCTTGAAGTTGAGTCTTCC 1934225
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || || | || || ||||| || || |||||||
Sbjct 1934226 GACACCATCGACAACG-TCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCTCCCGACCA 1934284
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | ||||| ||| |||||||||
Sbjct 1934285 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTCTCTCCGACTACAA 1934344
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||| ||||| | || || ||| | || || ||
Sbjct 1934345 CATCCAGAAGGAGTCCACTCTCCATCTCGTCCTCCG 1934380
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || ||||| || || |||||||| | || || ||| | |
Sbjct 1934394 ATGCAAATTTTCGTGAAGACCCTCACCGGAAAGACCATCACTCTGGAGGTAGAGTCGTCG 1934453
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | | | |||| | || ||| |||| || || || || || ||| | |||||
Sbjct 1934454 GATACCATCGATAACG-TCAAGTCAAAGATCCAGGATAAGGAAGGCATCCCCCCTGACCA 1934512
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || || || | || || || ||||| || || | |||||||| |||||||||
Sbjct 1934513 GCAACGTCTTATCTTTGCCGGTAAGCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAA 1934572
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||||||||| | || ||||| | || || |||
Sbjct 1934573 CATCCAAAAGGAATCCACTCTGCACCTTGTCCTCCGT 1934609
>seq12
Length=2198207
Score = 82.4 bits (90), Expect = 8e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| || ||| | ||||| ||||| || || | ||| ||||| ||||| ||
Sbjct 1200290 GACAAGGAGGGTATCCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 1200349
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
|||| ||||| || |||||||||||||| ||||| |||| || ||
Sbjct 1200350 GACGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 1200399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172393609600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |