Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq56 176 6e-39 seq61 150 2e-31 seq55 107 2e-18 >seq56 Length=3289960 Score = 176 bits (194), Expect = 6e-39 Identities = 338/493 (69%), Gaps = 13/493 (3%) Strand=Plus/Plus Query 111922 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTG 111981 |||||||| |||| ||||| || || || || ||| || ||||| || |||| | || Sbjct 1940103 ATGGTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCCCGCTACGTTGACCAGGGTG 1940162 Query 111982 GGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCA 112035 | | |||| | || | || |||| || ||||| |||||||| ||| || Sbjct 1940163 G---TAACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCTGGCACGCAGATGTCT 1940219 Query 112036 TGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCT 112095 | |||||||| || | ||| ||||| ||| | || || | || ||| ||||||| Sbjct 1940220 TCGAGTTCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTCGTGCCCGGGATCTCT 1940279 Query 112096 TCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGT 112155 ||| ||||||||||| ||| ||||| ||||||||| | ||||||| | || | ||| Sbjct 1940280 TCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAACGGTGACTGGA 1940339 Query 112156 CTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAG 112215 ||||||| || || || |||| | |||||| | |||| | ||||| ||||| || | Sbjct 1940340 CTCTCTTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGATGAGTTCGAGG 1940399 Query 112216 CCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCGACGGTGCCAGCTGCCGAT 112274 | |||||| ||||||||| | || | || ||| | ||| | ||| | || Sbjct 1940400 CTCTCTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGC-AAGACCATTAAGGCT-CAGAA 1940457 Query 112275 G-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAA 112333 | | ||| | || ||||| || | || || |||||||||| || | ||||| ||||| Sbjct 1940458 GCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTGTACAA 1940517 Query 112334 AGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393 || || || ||| | ||||| || || ||||| |||| || || |||||||| Sbjct 1940518 GGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCAGCTCCAACCT 1940577 Query 112394 CTGTACAGAAATC 112406 || || || ||| Sbjct 1940578 GTGCACTGAGATC 1940590 >seq61 Length=2613024 Score = 150 bits (166), Expect = 2e-31 Identities = 163/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGT 102165 ||||||| |||||| ||||| || || ||||| || ||| | ||| || ||| Sbjct 817895 CAGTTCCCTGTATTGCCAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGT 817954 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 || |||| ||| ||| || | || || || ||| ||||||||||||||||||| Sbjct 817955 CGA---CCTTCGCTTCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTG 818011 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 |||||||| | | || | |||||||||||||| ||||| ||||| |||||| ||||| Sbjct 818012 GTTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCT 818071 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 ||||||| || || |||||||||||||| |||||| Sbjct 818072 CCAACGAACTCATTTCTCGTGACGAGGGTCTCCAC 818106 >seq55 Length=3282825 Score = 107 bits (118), Expect = 2e-18 Identities = 221/325 (68%), Gaps = 19/325 (6%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| || || | || |||||| | ||| ||| || |||||||| | Sbjct 513275 AAGCCATCCATTTCAGTGAGAATCTGGTTCAGAGTGCTTTCACGCTCATCATTTCCG--- 513219 Query 16035 ATACCACCAGCACT-GCGTTG--------CTTTCCCACGGCATCAATCTCATCAATGAAG 16085 |||||| || | | ||| |||||| | |||||| || |||||||||||| Sbjct 513218 ---CCACCAACATTTGACTTGGCTCGGGACTTTCCAATGGCATCGATTTCATCAATGAAG 513162 Query 16086 ACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCC 16145 | ||||| || || | ||| ||| | |||||||| || ||||| || || Sbjct 513161 ATAATGCAGGGAGTGTTCTTGCGCGCGTTGGCGAAGAGATCACGGACACGAGAGGGACCG 513102 Query 16146 ACACCAACAAACATCTCCACAAAGTTTG--CGGCGGAACATTGGATGAAGGGGACATTAG 16203 ||||| || |||||||| || || | | | | | ||| || | |||||| || || Sbjct 513101 ACACCGACGAACATCTCAACGAACTCGGAACCACTG-ACACTGTA-GAAGGGCACGCCAG 513044 Query 16204 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 16263 ||||||| ||| |||| ||| || || |||||||| ||||| || ||| | ||| | Sbjct 513043 ATTCACCGGCAGTGGCCTTGGCAAGCAGGGTCTTACCAGTACCGGGAGGACCAGAGAGAA 512984 Query 16264 GGGCACCTCGTGGAATCTTGGCGCC 16288 ||||| || || |||||||| || Sbjct 512983 TAGCACCGCGGGGGATCTTGGCACC 512959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741895646800