Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq56 242 4e-59 seq61 111 2e-19 seq55 100 3e-16 >seq56 Length=3289960 Score = 242 bits (268), Expect = 4e-59 Identities = 577/865 (67%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 |||||||| | || ||||| ||||||||||| |||||| | | ||||||| | Sbjct 1940649 GGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATG 1940590 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| |||||| || ||| || |||| ||||| ||||| ||||| ||| Sbjct 1940589 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTG 1940530 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| |||||| |||| | || ||||| ||||| | || ||||| Sbjct 1940529 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 1940470 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 106692 || | ||| | | || | | || ||||| || |||| || |||||| |||||| Sbjct 1940469 GCATACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTA 1940414 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 ||| |||||| || || ||||| ||||| | || | |||||| | |||| || Sbjct 1940413 CTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTT 1940354 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || ||||| |||| ||| | ||| ||||||| ||||||||||| || || ||| | Sbjct 1940353 GGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGT 1940294 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 ||| || | | |||||||| | ||| | ||||| | ||| ||||| || | Sbjct 1940293 CCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAG 1940234 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926 || |||||||| | || ||| |||||||| ||||| || |||| || | || Sbjct 1940233 ATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGG 1940174 Query 106927 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 | ||| | ||| | || | || ||||| || ||| || || || || ||||| Sbjct 1940173 GCGCTTGTTA---CCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCAT 1940117 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 |||| |||||||| || ||||| || || | ||| || |||| | | Sbjct 1940116 AGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGAT 1940057 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 || | | || ||||| || ||||| ||| || || ||||| | |||| Sbjct 1940056 GCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAG 1939997 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 ||| | |||||||| | || ||| | || ||| ||||||||| | | Sbjct 1939996 AGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAG 1939937 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTT 107225 ||| || || || | || |||||||| || || | ||||| |||| ||| || Sbjct 1939936 CTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTTTT 1939878 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 |||||||| || ||| ||||| | | | || ||||| || |||||||| |||| | Sbjct 1939877 GGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAG 1939818 Query 107286 CCACACGCATAAACATGTATTGGGG 107310 | || ||||| | || || ||||| Sbjct 1939817 CAACGCGCATCAGCAGGTGCTGGGG 1939793 >seq61 Length=2613024 Score = 111 bits (122), Expect = 2e-19 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || || ||||| ||||| || |||||| || || ||||| ||||| Sbjct 818106 GTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 818047 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | | ||| || || ||||||||||||||||| ||| Sbjct 818046 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAGC 817987 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCAT 117461 || || |||| || ||| ||||||| |||| |||||| | ||| || Sbjct 817986 AGCGAAGGCAACCAGACGCGAAGCGAAGG---TCGACTCAGTGTCATTGATCCAACGGAT 817930 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 ||||| | |||||||| ||||||| || || Sbjct 817929 GGCCCACTCGGCCTTCTTGGCAATACAGGGAAC 817897 >seq55 Length=3282825 Score = 100 bits (110), Expect = 3e-16 Identities = 166/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421 |||||| | |||||| || ||||||||||||| ||| || || || | ||| ||| | Sbjct 513192 CTTTCCAATGGCATCGATTTCATCAATGAAGATAATGCAGGGAGTGTTCTTGCGCGCGTT 513133 Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9480 | |||||||| || || | || || ||||| || |||||||| || || | | Sbjct 513132 GGCGAAGAGATCACGGACACGAGAGGGACCGACACCGACGAACATCTCAACGAACTCGGA 513073 Query 9481 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 | | | ||| || | |||||| || ||||||||| ||| |||| ||| || || Sbjct 513072 ACCACTG-ACACTGTA-GAAGGGCACGCCAGATTCACCGGCAGTGGCCTTGGCAAGCAGG 513015 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595 |||||||| ||||| || ||| | ||| | ||||| || || |||||||| || Sbjct 513014 GTCTTACCAGTACCGGGAGGACCAGAGAGAATAGCACCGCGGGGGATCTTGGCACC 512959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980320640600