Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq56 242 4e-59
seq61 111 2e-19
seq55 100 3e-16
>seq56
Length=3289960
Score = 242 bits (268), Expect = 4e-59
Identities = 577/865 (67%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
|||||||| | || ||||| ||||||||||| |||||| | | ||||||| |
Sbjct 1940649 GGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATG 1940590
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || |||| |||||| || ||| || |||| ||||| ||||| ||||| |||
Sbjct 1940589 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTG 1940530
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
||||| ||||||||||| |||||| |||| | || ||||| ||||| | || |||||
Sbjct 1940529 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 1940470
Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 106692
|| | ||| | | || | | || ||||| || |||| || |||||| ||||||
Sbjct 1940469 GCATACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTA 1940414
Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752
||| |||||| || || ||||| ||||| | || | |||||| | |||| ||
Sbjct 1940413 CTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTT 1940354
Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812
|| ||||| |||| ||| | ||| ||||||| ||||||||||| || || ||| |
Sbjct 1940353 GGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGT 1940294
Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872
||| || | | |||||||| | ||| | ||||| | ||| ||||| || |
Sbjct 1940293 CCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAG 1940234
Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926
|| |||||||| | || ||| |||||||| ||||| || |||| || | ||
Sbjct 1940233 ATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGG 1940174
Query 106927 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986
| ||| | ||| | || | || ||||| || ||| || || || || |||||
Sbjct 1940173 GCGCTTGTTA---CCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCAT 1940117
Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046
|||| |||||||| || ||||| || || | ||| || |||| | |
Sbjct 1940116 AGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGAT 1940057
Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106
|| | | || ||||| || ||||| ||| || || ||||| | ||||
Sbjct 1940056 GCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAG 1939997
Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166
||| | |||||||| | || ||| | || ||| ||||||||| | |
Sbjct 1939996 AGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAG 1939937
Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTT 107225
||| || || || | || |||||||| || || | ||||| |||| ||| ||
Sbjct 1939936 CTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTTTT 1939878
Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285
|||||||| || ||| ||||| | | | || ||||| || |||||||| |||| |
Sbjct 1939877 GGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAG 1939818
Query 107286 CCACACGCATAAACATGTATTGGGG 107310
| || ||||| | || || |||||
Sbjct 1939817 CAACGCGCATCAGCAGGTGCTGGGG 1939793
>seq61
Length=2613024
Score = 111 bits (122), Expect = 2e-19
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
|||||||||||| || || ||||| ||||| || |||||| || || ||||| |||||
Sbjct 818106 GTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 818047
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | || | | ||| || || ||||||||||||||||| |||
Sbjct 818046 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAGC 817987
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA---AACCATTTCAT 117461
|| || |||| || ||| ||||||| |||| |||||| | ||| ||
Sbjct 817986 AGCGAAGGCAACCAGACGCGAAGCGAAGG---TCGACTCAGTGTCATTGATCCAACGGAT 817930
Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTAC 117494
||||| | |||||||| ||||||| || ||
Sbjct 817929 GGCCCACTCGGCCTTCTTGGCAATACAGGGAAC 817897
>seq55
Length=3282825
Score = 100 bits (110), Expect = 3e-16
Identities = 166/236 (70%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 9362 CTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGAT 9421
|||||| | |||||| || ||||||||||||| ||| || || || | ||| ||| |
Sbjct 513192 CTTTCCAATGGCATCGATTTCATCAATGAAGATAATGCAGGGAGTGTTCTTGCGCGCGTT 513133
Query 9422 TTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9480
| |||||||| || || | || || ||||| || |||||||| || || | |
Sbjct 513132 GGCGAAGAGATCACGGACACGAGAGGGACCGACACCGACGAACATCTCAACGAACTCGGA 513073
Query 9481 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539
| | | ||| || | |||||| || ||||||||| ||| |||| ||| || ||
Sbjct 513072 ACCACTG-ACACTGTA-GAAGGGCACGCCAGATTCACCGGCAGTGGCCTTGGCAAGCAGG 513015
Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC 9595
|||||||| ||||| || ||| | ||| | ||||| || || |||||||| ||
Sbjct 513014 GTCTTACCAGTACCGGGAGGACCAGAGAGAATAGCACCGCGGGGGATCTTGGCACC 512959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980320640600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |