Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 >seq2 Length=3819764 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || ||||| || || ||||| |||||| | || | || ||| Sbjct 1934830 ACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCCTCC 1934771 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || ||||||||| | || | ||||||||||| Sbjct 1934770 AGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGG 1934711 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | |||| ||| | || || || | || ||||| || Sbjct 1934710 ATCTTGCTCTTAACGTTGTCGATCGTGTCAGATGATTCCACTTCCAGCGTGATGGTCTTG 1934651 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| ||||| || |||||| Sbjct 1934650 CCAGTGAGTGTCTTGACAAAAATTTGCATA 1934621 Score = 93.3 bits (102), Expect = 3e-14 Identities = 140/197 (71%), Gaps = 8/197 (4%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| || || ||||| ||||| || ||| | || |||| || ||||| || |||||||| Sbjct 1934585 TTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAA 1934526 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || ||||||||||| | || | || ||||| || ||||| ||||| Sbjct 1934525 GATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGAC--- 1934469 Query 34910 TGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 | ||||||| | ||| | ||| || || | || ||||| ||||| ||||| |||| Sbjct 1934468 -GTTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCT 1934410 Query 34966 TCACAAAGATCTGCATA 34982 |||| || || |||||| Sbjct 1934409 TCACGAAAATTTGCATA 1934393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633342829320