Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq2 87.8 1e-11
seq48 86.0 5e-11
>seq2
Length=3819764
Score = 87.8 bits (96), Expect = 1e-11
Identities = 156/223 (70%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313
||||||||| ||||| || || || ||| ||||| || ||||| || | || ||
Sbjct 1934612 GAGACGGAGGACAAGGTGCAGAGTGGATTCCTTTTGG--ATGTTGTAGTCGGACAGGGTG 1934555
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| ||| ||||| || || |||||||| ||||| | |||||| ||||| || || |||
Sbjct 1934554 CGGCCATCCTCAAGCTGCTTACCGGCAAAGATAAGACGTTGCTGGTCAGGGGGGATGCCT 1934495
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCGAG 563432
|| ||||| || || ||| || || || || ||||| | || | | || ||
Sbjct 1934494 TCCTTATCCTGGATCTTTGACTTGACGTTATCGATGGTATCCGAC-GACTCTACCTCCAG 1934436
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
||| | || || || || || || || |||||||||||||||
Sbjct 1934435 AGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAAATTTGCATA 1934393
>seq48
Length=3188669
Score = 86.0 bits (94), Expect = 5e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| || || ||||| || || || || || ||||| || ||||| ||||| || || ||
Sbjct 552159 GCTGTCATCACTGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCTACCAAGGACGCC 552218
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| | |||||||| || || || || ||||| || || || || ||||||||||| |
Sbjct 552219 GGTCTCATTGCTGGTCTCAACGTCCTCCGTATCATTAACGAGCCCACTGCTGCTGCTATC 552278
Query 550520 GCATATGGACTTGATAA 550536
|| || || ||||| ||
Sbjct 552279 GCTTACGGTCTTGACAA 552295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029292562506850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |