Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq61 140 6e-28
>seq61
Length=2613024
Score = 140 bits (154), Expect = 6e-28
Identities = 296/447 (66%), Gaps = 9/447 (2%)
Strand=Plus/Plus
Query 25878 GCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCAT 25937
||| ||||| ||||| |||||||| ||||| ||||| ||| ||||| || || ||||
Sbjct 817968 GCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCAT 818027
Query 25938 CTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAG 25997
||||||||||||| || || |||||||| || ||| |||||||| |||||
Sbjct 818028 CTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCCAACGAACTCATTTC 818087
Query 25998 CAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCA 26057
| |||||||||||||||| ||||| || || || |||| | | ||| || |||
Sbjct 818088 TCGTGACGAGGGTCTCCACACTGATTTCGCTTGTCTCCTCTTCTC---TCACCTGAACCA 818144
Query 26058 CAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGA 26117
| ||| || || ||| | ||||| ||||| || | |||||| ||||
Sbjct 818145 CCGCCCTGATCCCAAGGTCGTTGAAGACATCATTGTCGAGGCCGTTGGTATCGAGCAGGA 818204
Query 26118 GTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCA 26177
||| | | ||||||||| || |||||| ||||
Sbjct 818205 GTTCCTCACTGACGCTCTTCCCTGTGGCCTGCTTGGCATGAACGCCAAGCTCATGTGCCA 818264
Query 26178 ATACATTGAGTATGTGGCCGACCATCTGCT-GTGCCAGCTGGGACTCGCCAGA--CTCTA 26234
||||| |||| ||| || |||| ||| || ||| | ||| | | ||| |||
Sbjct 818265 GTACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGCCCTTGGCA---ACAAGAAGTACTA 818321
Query 26235 CAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTT 26294
|| | | ||||| |||||||| ||||| ||| || ||| || |||||||||||
Sbjct 818322 CAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTT 818381
Query 26295 CTTTGAAAAGAGGGTCGGCGACTATCA 26321
||| || ||| | ||||| ||||||||
Sbjct 818382 CTTCGAGAAGCGTGTCGGTGACTATCA 818408
Score = 89.7 bits (98), Expect = 1e-12
Identities = 160/233 (69%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| ||||||||| || |||||||||||
Sbjct 817511 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATCTA 817570
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594
||||||| | ||| |||| || | ||| || || ||| || ||| |
Sbjct 817571 TCCAAGGATCTCCACGACTGGCACAACCGCCTCAACGATGATGAGCGTTACTTCATCTCC 817630
Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || ||||| || ||||| || ||||| || ||||| || ||| |||| |
Sbjct 817631 CACGTCCTTGCCTTCTTCGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGTCGAGCGT 817690
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|||| | | || || ||| ||||| || |||||||||||||||||
Sbjct 817691 TTCAGCGGAGAGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGAT 817743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844045313600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |