Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq56 219 5e-52 seq61 111 2e-19 seq55 102 1e-16 >seq56 Length=3289960 Score = 219 bits (242), Expect = 5e-52 Identities = 570/862 (66%), Gaps = 13/862 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| || || | ||||| || || |||| |||||||| || ||||| || | | Sbjct 1939793 CCCCAGCACCTGCTGATGCGCGTTGCTGTCGGTATCCACGGCGAGGACATCGAGAAGGCC 1939852 Query 75272 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || |||||||||| ||| |||| ||||| | || || ||||| Sbjct 1939853 ATTGAGACCTACCACTTGATGTCCCAAAAGTAC-TTCACCCACGCCTCCCCCACTCTCTT 1939911 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || | || || || ||| | | ||||||||| ||| || | || Sbjct 1939912 CAACGCCGCCACTCCCCAGCCCCAGCTTGCTTCTTGCTTCCTGGTCGACATGTCCGCAGA 1939971 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | || | |||||||| | ||||||| | ||||| || || ||| ||||| Sbjct 1939972 CAGCATTGAGGGTATCTACGACACTCTTAAGACCTGTGCTATGATTTCCAAGACCGCTGG 1940031 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 || ||||| || | | || | | |||| || ||| | || || || Sbjct 1940032 TGGCATTGGTTTGAATGTTCACCGCATCCGTGCCACCGGTTCCTACATTGGTGGAACCAA 1940091 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || |||||||| |||| ||||| || || || || ||| || ||||| || Sbjct 1940092 TGGCTCCTCCAATGGTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCCCGCTACGT 1940151 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCA 75624 | || ||| || |||| | || | | || ||||| |||| || ||||| Sbjct 1940152 TGACCA---GGGTGGTAACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCTGGCA 1940208 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || ||| || | |||||||| || | || ||||| ||| | ||||| | ||| Sbjct 1940209 CGCAGATGTCTTCGAGTTCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTCGTGC 1940268 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | |||||||| | | || |||| ||| || || ||||||||||| ||||||| Sbjct 1940269 CCGGGATCTCTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAA 1940328 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| |||| ||||| || || |||| | |||||| | || | ||||| Sbjct 1940329 CGGTGACTGGACTCTCTTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGA 1940388 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||| || || |||||| ||||| || ||||||| | | | ||| | Sbjct 1940389 TGAGTTCGAGGCTCTCTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGCAAGACCATTA- 1940447 Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 || | | || | | ||| | || ||||| | | ||||| |||||||| | || | | Sbjct 1940448 AGGCTCAGAAGCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCA 1940507 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 |||| |||||||||||||| ||||||||||| ||||| ||||| ||||||| || | Sbjct 1940508 TGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCGCA 1940567 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 |||| || || ||||| || || | ||||||| | | |||||| |||||||||| Sbjct 1940568 GCTCCAACCTGTGCACTGAGATCATCGAGTACAGTGCTCCTGATGAGGTCGCTGTTTGCA 1940627 Query 76044 ATTTGGCATCAATCGCCCTTCC 76065 | ||||| || | |||||||| Sbjct 1940628 ACTTGGCTTCTCTTGCCCTTCC 1940649 >seq61 Length=2613024 Score = 111 bits (122), Expect = 2e-19 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTT---TGACACAAAGTCT 65064 || || ||||||| |||||||| | ||||| || ||| | |||||| |||| Sbjct 817897 GTTCCCTGTATTGCCAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGTCG 817956 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGG 65124 ||||||| ||| || |||| || || ||| ||||||||||||||||| || Sbjct 817957 A---CCTTCGCTTCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGT 818013 Query 65125 TCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCA 65184 || ||| | | || | ||| | |||||||| ||||| ||||| || || |||||| Sbjct 818014 TCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCTCC 818073 Query 65185 AATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 || ||||| ||||| || || |||||||||||| Sbjct 818074 AACGAACTCATTTCTCGTGACGAGGGTCTCCAC 818106 >seq55 Length=3282825 Score = 102 bits (112), Expect = 1e-16 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 ||||||||||||||||| || || ||||| | ||| || ||||| || |||||||| Sbjct 512959 GGTGCCAAGATCCCCCGCGGTGCTATTCTCTCTGGTCCTCCCGGTACTGGTAAGACCCTG 513018 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATCCAGTG-CTCTGCCGCAAA 175394 || ||| |||| || |||||||| || || ||| | ||||| | || | | Sbjct 513019 CTTGCCAAGGCCACTGCCGGTGAATCTGGCGTGCCCTTC-TACAGTGTCAGTGGTTCCGA 513077 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 || || |||||||| || ||||| ||| || | || || |||||||| | | ||| Sbjct 513078 GTTCGTTGAGATGTTCGTCGGTGTCGGTCCCTCTCGTGTCCGTGATCTCTTCGCCAACGC 513137 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 ||| | || || || ||| ||||||||||||| || ||||| Sbjct 513138 GCGCAAGAACACTCCCTGCATTATCTTCATTGATGAAATCGATGC 513182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569115287200