Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq2 104 4e-17 >seq2 Length=3819764 Score = 104 bits (114), Expect = 4e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | || || || ||||| | || | ||| || || || Sbjct 1934402 AATTTGCATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGACTCCTTCTGGATGTT 1934343 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||||| | || | | ||| || | || |||||||| || || | | ||| || Sbjct 1934342 GTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAGATGAGACGCTGCTG 1934283 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || || || ||||| || || |||| || | || || || ||||| Sbjct 1934282 GTCGGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGA 1934223 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||||||||| ||||| || || || || || || || ||||| || |||||||| Sbjct 1934222 AGACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTTACGAAGATTTGCAT 1934166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653669030800