Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq56 178 4e-39 seq46 127 6e-24 seq6 125 2e-23 >seq56 Length=3289960 Score = 178 bits (196), Expect = 4e-39 Identities = 565/873 (65%), Gaps = 5/873 (1%) Strand=Plus/Minus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || | |||||| ||||||||| || || || || || | ||||||||| Sbjct 1940601 CTGTACTCGATGATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGG 1940542 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 || || |||| |||||||||||||| || ||| | ||| | || ||||| |||| Sbjct 1940541 TTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGG 1940482 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| |||||| | | || ||||| |||| | | ||| ||| Sbjct 1940481 GCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAATGGTCTTGCGGCCACGGCCCTCC 1940422 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || ||| || || | | | || |||||||| |||| || |||| | Sbjct 1940421 TTCTCGTACTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAG 1940362 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927 || | |||||| || || | ||| ||| | ||||||| ||| || | | Sbjct 1940361 GCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGA 1940302 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987 ||| | ||| | ||| ||||| || |||| || || || | ||||| ||| Sbjct 1940301 TCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTC 1940242 Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047 || || || || | ||| || | ||| | || |||||||| || || ||||| Sbjct 1940241 TTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAAC 1940182 Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104 |||| | |||| |||||||| || || || || ||||| |||||||| |||| Sbjct 1940181 GCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGG 1940122 Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164 |||||||||| |||||||||||| | |||||||||||| | ||| | ||||| | | Sbjct 1940121 AGCATAGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCA 1940062 Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 || | |||| || | ||||| ||||| | || ||||| ||| || | Sbjct 1940061 CGGATGCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTC 1940002 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | ||| | | | ||||| ||||| || | ||| | || |||| ||| Sbjct 1940001 TTAAGAGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAA 1939942 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | || || | || || | |||||||| || || || | || || | || ||| Sbjct 1939941 GCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTAC 1939882 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 || | ||||| | | ||| ||||| | |||||| | | ||||| |||| | Sbjct 1939881 TTTTGGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCG 1939822 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACT-CCATCAATTCGCAG 156463 | || || | |||| || ||||| |||||||| ||| |||| || | || || || Sbjct 1939821 ACAGCAACGCGCATCAGCAGGTGCTGGGGACGCTCGGCAA-CACTGCCGTTGATACGGAG 1939763 Query 156464 AAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 ||| |||| || ||||| || || || ||||| Sbjct 1939762 AAGATATGAACGCTCCAGGGTCTTGAAACCGAA 1939730 >seq46 Length=704785 Score = 127 bits (140), Expect = 6e-24 Identities = 205/295 (69%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| | |||||| || |||||||| | || || ||||| Sbjct 218272 TCTTCCAGAGCCTTGACCAGCTTACGCTGGATGTAACCAGTCTCGGCAGTCTTGACAGCG 218331 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| ||||| |||||||| ||||||| |||||||| | || || | Sbjct 218332 GTATCAATAAGACCCTCACGACCAGCCATAGCGTGGAAGAAGAATTCAGTGGGAGTCAAG 218391 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | | | ||| |||||||||| ||||||| |||||| || | ||| |||||| Sbjct 218392 CCTCGGAGGTACGAGTTCTCAACGAATCCACGCGACTCGGGAGAGTAATCGTCCTTGGTG 218451 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 ||||| |||| || | || || | ||| | || ||||||||||| || ||| ||| Sbjct 218452 AAGTGGGGCAAAGTGCGGTACTTGAAACCGAAGGGAATACGCTTTCCTTCCACGGATTGC 218511 Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCCAG 302866 ||||| | | | | ||||||| ||||| || | | | |||||||| |||| Sbjct 218512 TGTCCGACGAGGGCAGTCATCTGGGAAATGTTGATAGCGGAACCCTTGGAACCAG 218566 Score = 109 bits (120), Expect = 2e-18 Identities = 109/141 (77%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 301812 CAGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGC 301871 ||||||||| | | |||||| |||||| |||| ||||| ||| || | |||||||| Sbjct 217497 CAGAATTTCCTTCAGACGGGGTACACCAAGGGTGACGTT---CTTAGATGACACACCAGC 217553 Query 301872 AAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAAT 301931 ||||||||| || ||||| || | ||||||| |||||||||||| || || |||| Sbjct 217554 AAAGTGGAAGGTGTTCAGGGTCATCTGAGTAGCAGGCTCACCAATAGACTGGGCTGCAAG 217613 Query 301932 CATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 217614 GACACCAACCATTTCACCAGG 217634 >seq6 Length=642664 Score = 125 bits (138), Expect = 2e-23 Identities = 339/510 (66%), Gaps = 14/510 (3%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | ||||||||||| |||||||| || |||||||| ||||||||||| ||| Sbjct 503986 GCACCGTGGGCGATCATACAATCGCGCTCCATCTCTCCGAAACGGAGACCACCATCACGA 503927 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | ||||||| |||||||||| || ||| | ||||||| || ||| || Sbjct 503926 GCACGACCCTCGACAGGCTGACGGGTCAGAATCTGGGTAGGACCACGGGCACGGGCGTGG 503867 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGCTC 251664 ||| || | |||||||| |||||||||||| | | ||| || | ||||| Sbjct 503866 ATCTTGTCGTCGACCATATGGCGCAGACGCTGGTAGTAGGTGGGTCCTAGGAAGACCTGA 503807 Query 251665 GAAGGCAT-TTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTCATA 251723 | | ||| |||| ||||| | |||| ||||| || ||| |||| ||| | || Sbjct 503806 GCAACCATCTTGC-GACCAGTGTGTCCGTTGTACATGACCTCGAATCCACGAGACTGGTA 503748 Query 251724 ACCAAGTTTCTGTAGCTCTGAA--GCAATATCA-CCAATCTTGAATTTGCTAAAACTGGT 251780 || ||| | ||| || | || | | | | ||| | | | ||| || Sbjct 503747 GCCGTGTTCACGCAGC---AAACGGGAAACTGAGTCGACAGTGACATCGGTGAAAGGAGT 503691 Query 251781 GCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGTTG 251840 | || || | | ||| || | || ||| || | ||| ||| || Sbjct 503690 AGCATCACCCTCGAAACCACGCAGAGCTGAGACCTTGGACAATTGACACTCGATCAAATG 503631 Query 251841 GGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCC 251900 ||| || ||||| ||| |||||||| ||||| ||||| || | |||||| || || Sbjct 503630 GGCAATGGTCATTCGAGAAGGAATAGCGTGGGGGTTGATAATCAGGTCGGGCACCACACC 503571 Query 251901 ATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 ||| |||||||||||| ||| |||| | |||| | | ||||| || ||||| || Sbjct 503570 TTCACGAGTGAAGGGCATGTCC---TCCTGACGATAAGTAATACCAATGGTACCCTTCTG 503514 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||| |||||| ||||| || Sbjct 503513 ACCGTGACGAGAGGCGAACTTGTCACCGAT 503484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816374251905