Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq61 145 9e-29 seq56 145 9e-29 seq55 131 2e-24 >seq61 Length=2613024 Score = 145 bits (160), Expect = 9e-29 Identities = 174/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || || || || ||| |||||| |||||||||||||| | || ||||| ||||||| Sbjct 818405 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 818346 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 | ||| ||||||| | ||||||| ||| | | || || | | |||| || ||| Sbjct 818345 AAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCCAAGGGCCACGAGGAGACGG 818286 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC- 868878 || ||||||||||||||||||||||||||||| |||||||||||| | || ||||| Sbjct 818285 TCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCATGCCAAGCAG-GCCACA 818227 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGAT 868932 || || | || | | ||||| | |||||| | ||||||||||| ||||| Sbjct 818226 GGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCCTCGACAATGAT 818173 Score = 114 bits (126), Expect = 2e-19 Identities = 252/372 (68%), Gaps = 17/372 (5%) Strand=Plus/Plus Query 1726685 TGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCCG 1726744 ||||| || | |||||||| | |||||||| ||| | || | | || || |||||| Sbjct 1532213 TGCGGGTGCGAGGCGGCGCCAATGGCGTCGACGGCCACGGTCAGGTTGCCATCTGTGCCG 1532272 Query 1726745 TTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCG 1726804 |||||| ||||||||| | | ||| |||| |||| ||||||||||| |||| |||| Sbjct 1532273 TTCTTGTAGCCGATGGGGAAAGACAGACCCGAGGCCAGCTCGCGGTGCAGCTGGGACTCG 1532332 Query 1726805 GTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCA---AATAAGGGGCCACC 1726861 || || || ||||| | |||||| ||| | |||||| |||| | | |||| Sbjct 1532333 GTTGTACGGGCGCCGATCGCGCCCAACGAGATCAGGTCCGCCAGGTACTGCGGGG----- 1532387 Query 1726862 AGA-GGACT-GAGAAACTCGACGGCCACGGGCTGATCG--ACGGCGACGACGAGATCGCG 1726917 ||| || | || | |||| ||| | ||| || || || | | | || ||| Sbjct 1532388 AGATGGTGTCCAGCATCTCGCTGGCGATAGGCAGACCGGTACTG-GTC----AGGTCGGT 1532442 Query 1726918 CAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGG 1726977 |||| || ||| | || || | | | | | | | | |||||| |||||| Sbjct 1532443 GTACAGCTTACGGGACACGCGGAGACCCTTGTTGATGTTGTAGGTCTCGTCGATGTCGGG 1532502 Query 1726978 GTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCAT 1727037 |||| || ||| |||||||| || || || ||||| ||||| || | ||||||||||| Sbjct 1532503 GTCGTTGATCAGACCCTTCCAGCCAACTGTTGTGCGGGGCTTCTCCAGGTAGGCGCGCAT 1532562 Query 1727038 GACCACGCAAAG 1727049 || ||||| || Sbjct 1532563 GATGACGCAGAG 1532574 Score = 113 bits (124), Expect = 6e-19 Identities = 177/251 (71%), Gaps = 3/251 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||| ||||| ||| | |||| | | ||| Sbjct 817764 GAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAACGAGCCTCGGGAATCTGG 817705 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| |||| || || ||||||| ||| ||||| |||||| ||| ||||| Sbjct 817704 ACCTCTCCGCTGAAACGCTCGACCAGGTTTTCGTTGACGATACCGTCGGAGGCAGCGAAG 817645 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGG 869809 || || |||||||| ||| |||| ||||| || ||| ||| ||| ||||| | Sbjct 817644 AAGGCAAGGACGTGGGAGATGAAGTAACGCTCATCATCGTTGAGGCGGTTGTGCCAGTCG 817585 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | || | || || | |||||| |||||||||| |||||||||||||| ||| Sbjct 817584 TGGAGATCCTTGGATAGATCAATCTCCTCAGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 817525 Query 869870 TACATCTCCCA 869880 ||||| | ||| Sbjct 817524 TACATTTGCCA 817514 Score = 95.1 bits (104), Expect = 1e-13 Identities = 139/195 (71%), Gaps = 9/195 (5%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| || | ||||||| |||| ||| |||||||| || || ||||| Sbjct 818100 ACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACCACGCTT 818041 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | ||| || ||||| ||||| |||||||| || || || Sbjct 818040 CTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAGCAGCGAA 817981 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTG---TTGATCCACTTCATCGC 869355 | | | || ||| || ||| ||||| ||| || |||||||| || || Sbjct 817980 GGCAACCAGACGCGAAGCGAAG--GTCGA----CTCAGTGTCATTGATCCAACGGATGGC 817927 Query 869356 CCAGTCGGCCTTTTT 869370 ||| |||||||| || Sbjct 817926 CCACTCGGCCTTCTT 817912 >seq56 Length=3289960 Score = 145 bits (160), Expect = 9e-29 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||||||||||||||| | || ||||| |||| |||||| | || |||||| Sbjct 2521707 GCTGCCAACTACCTCGACATCAAGGCCCTCCTCGACGTTGGCTGCAAGACCGTCGCCAAC 2521766 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300 ||||||||||||||||| ||||||||||||||||||||||| |||||| || ||| Sbjct 2521767 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 2521821 Score = 104 bits (114), Expect = 3e-16 Identities = 203/300 (68%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| || |||| || || || |||||||| || || | || ||||| Sbjct 1940158 CTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGA 1940099 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||| ||||| || | | ||||| |||| ||| || | ||| | || || Sbjct 1940098 GGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATTCAAACC 1940039 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||||| || || | |||||| || | || || || || ||||||||||| ||||| Sbjct 1940038 AATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATACCCTC 1939979 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| || |||||| || || ||||| || | || || || | ||| | Sbjct 1939978 AATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGC 1939919 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 |||||||||||| ||||| | || |||||| ||| | ||||| || |||||| Sbjct 1939918 GGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGTGGTAGGT 1939859 Score = 86.0 bits (94), Expect = 8e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| || || ||| ||||| || ||||| ||||| || || || || || ||||| Sbjct 1940311 CATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTT 1940252 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 ||||||||||| ||| ||||| | |||| | || |||||||| ||||||||||| Sbjct 1940251 ACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTA 1940192 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTG 1628592 | |||||| || || ||||||| Sbjct 1940191 GATGGCAAACGCACCAGGGCGCTTG 1940167 >seq55 Length=3282825 Score = 131 bits (144), Expect = 2e-24 Identities = 124/157 (79%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||| ||||| || || || || ||| ||||||||||| | ||||| |||||| Sbjct 1328761 GACAGCATTGGCGGAACAGTAACATGTGTGATCCGCAACGTGCCCGTCGGCCTAGGCGAG 1328702 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | || ||| |||||||||||||||||| ||||| |||||| Sbjct 1328701 CCCTGCTTCGACAAGCTGGAAGCCAAGCTCGCCCACGCCATGCTCAGCATCCCCGCCACC 1328642 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 1328641 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 1328605 Score = 89.7 bits (98), Expect = 6e-12 Identities = 213/320 (67%), Gaps = 8/320 (3%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGC 18157 ||||||||| ||| | || | |||||||| || |||| || || || ||||| Sbjct 1329440 TGGCGAGTCTCACTGC-CGCTCTGTCGGCTGTATTGTCGATGGATGCCCTCCTGGCATGG 1329382 Query 18158 CACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCAC 18217 || ||||||||||||||||||| ||| || || || || || || ||| |||| | Sbjct 1329381 AGCTCACCGAGGCCGACATCCAGCCCCAGATGACCCGCCGTCGTCCCGGTCAGAGCGCCC 1329322 Query 18218 TTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCC 18277 | | || ||||| ||||| || || ||| |||||||| ||||| ||| ||| Sbjct 1329321 TCACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCTGGCACAGAGTTCGGAG 1329262 Query 18278 TCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACT 18337 |||| || ||| | || | ||| | | || ||| |||||||| ||| |||| Sbjct 1329261 TCACTCTAGGCACACCAATTGGCATGATGGTCCGCAATGAGGACCAGCGCCCCAAGGACT 1329202 Query 18338 ATTCCGAC------ATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTACACCTACATGG 18391 | || | ||| | | | || || ||| || ||||||| ||||||| | | Sbjct 1329201 ACGGCGGCAGCACAATGGACTTGTTCCCCCGCCCCAGCCATGCCGACTTCACCTACCTCG 1329142 Query 18392 CCAAGTACGGCATCAAGGCG 18411 |||||||| | |||||| Sbjct 1329141 AGAAGTACGGTGTTAAGGCG 1329122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107133865795605