Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq56 145 1e-28
seq61 140 5e-27
seq30 109 9e-18
>seq56
Length=3289960
Score = 145 bits (160), Expect = 1e-28
Identities = 101/115 (88%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||||||||||||||| |||||||||| | || ||||||||||| ||||||
Sbjct 2521707 GCTGCCAACTACCTCGACATCAAGGCCCTCCTCGACGTTGGCTGCAAGACCGTCGCCAAC 2521766
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| |||||||||||||| |||||||| |||||||||||||| |||||| || |||
Sbjct 2521767 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGCAAGACCTTCAACATCCAGAACG 2521821
Score = 104 bits (114), Expect = 4e-16
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 2071810 GCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCGCATAAACAGG 2071869
|||||| ||||| ||||| | |||||| ||| || | | || || ||| |||||
Sbjct 1940361 GCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGA 1940302
Query 2071870 TCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 2071929
|| ||||| || |||| |||||||| || || || || ||||| |||||||||
Sbjct 1940301 TCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTC 1940242
Query 2071930 TTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 2071989
|| || ||||| | |||| || || |||||||| |||||||||||| ||||||
Sbjct 1940241 TTACGGAGATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAAC 1940182
Query 2071990 GCGCCCTTGCGCTTG 2072004
|| || |||||||
Sbjct 1940181 GCACCAGGGCGCTTG 1940167
>seq61
Length=2613024
Score = 140 bits (154), Expect = 5e-27
Identities = 183/251 (73%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| ||| || || || ||| |||||| |||||||||||||| | |
Sbjct 818422 TGACACCAGCCTTCTGATAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 818363
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| ||||||| | ||| |||||||| | ||||| ||||| | || |
Sbjct 818362 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTTGTTGCCAA 818303
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | || || ||||| ||||| || || ||||||||||||||||| ||||||||
Sbjct 818302 GGGCCACGAGGAGACGGTCAGCGACAAACTCGATGTACTGGCACATGAGCTTGGCGTTCA 818243
Query 794071 TGCCGATGAGCGCCAC-GGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||| | || ||||| ||| || | || ||| ||||| | |||||| | ||||||
Sbjct 818242 TGCCAAGCAG-GCCACAGGGAAGAGCGTCAGTGAGGAACTCCTGCTCGATACCAACGGCC 818184
Query 794130 TCGATGATGAT 794140
|||| |||||
Sbjct 818183 TCGACAATGAT 818173
>seq30
Length=4172343
Score = 109 bits (120), Expect = 9e-18
Identities = 86/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| ||||||||||||||||| |||||||||||| |||| || || ||| | |
Sbjct 2713736 GTACTTGGTAACGGCCTTGGTACCCTCAGAGACGGCGTGCTTGGCAAGCTCACCGGGGAG 2713677
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTG 1485573
||| ||||| |||| |||||||||||| |||| | ||| |||
Sbjct 2713676 GATGAGGCGTACGGAGGTCTGGATCTCCCGGGAGGAGATGGTG 2713634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916239485653535
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |