Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq61 86.0 6e-12 seq2 84.2 2e-11 >seq61 Length=2613024 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 47046 GAGGCGGTGAGCATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCC-GTCGCCTTGCTGGG 47104 ||||| || | ||||| ||||||| | |||| || || ||| || |||| ||| || Sbjct 818182 GAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGCCT-GCTTGG 818240 Query 47105 CATGAACGCACAGTCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCA 47164 ||||||||| || |||||| | || || |||||||| || || ||||| | ||| Sbjct 818241 CATGAACGCCAAGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGTCTCCTCGTGGC 818300 Query 47165 GCTCGGACAAC-CGAAATATTTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTT 47223 || || |||| ||| || | || || || || || || || ||| | ||| | Sbjct 818301 CCTTGG-CAACAAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCT 818359 Query 47224 CGCTCGAGGGCAAAACCAATTTTTTCGAGAAACGAGTCGGAGAGTATAAG 47273 | || | ||||| ||||| || |||||||| || ||||| || ||| || Sbjct 818360 CCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCAG 818409 >seq2 Length=3819764 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || ||||||||||||||||||| |||||| ||| || ||||| || || | Sbjct 1934131 GACTCCTTCTGAATGTTGTAGTCGCTCAGGGTACGGCCATCCTCAAGCTGCTTGCCTGCG 1934072 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 | || || ||||| || || ||||| |||||||| ||||| Sbjct 1934071 AAAATCAGGCGCTGCTGGTCAGGAGGAATGCCTTCCTTATC 1934031 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| |||||||||||| || ||| || ||| || ||||| ||||||| | Sbjct 1934587 GATTCCTTTTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCAAGCTGCTTACCGGCA 1934528 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || || || || || |||||||| ||||| || ||| || | Sbjct 1934527 AAGATAAGACGTTGCTGGTCAGGGGGGATGCCTTCCTTATCCTGGATCTTTGACTTGACG 1934468 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||||| | || ||| || || | || | || || || || || || || Sbjct 1934467 TTATCGATGGTATCCGACGACTCTACCTCCAGAGTGATGGTCTTTCCGGTGAGGGTCTTC 1934408 Query 132110 ATGAAAATCTGCAT 132123 | |||||| ||||| Sbjct 1934407 ACGAAAATTTGCAT 1934394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610812753400