Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq61 143 4e-28
seq56 86.0 9e-11
>seq61
Length=2613024
Score = 143 bits (158), Expect = 4e-28
Identities = 242/342 (71%), Gaps = 19/342 (6%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||||||||| || |||||||| |||||| | || |
Sbjct 817510 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATC 817568
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
| | || |||| ||||| ||| | | ||| || ||||| | |||
Sbjct 817569 TATCCAAGGATCTCCACG----ACTGGCACAACCGCCTCAACGATGATGAGCGTTACTTC 817624
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| ||||| || ||| ||| ||| || ||||| ||| |||||||
Sbjct 817625 ATCTCCCACGTCCTTGCCTTCTT-CGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGT 817683
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| || || | ||||||||| | || ||||| |||| || ||||| ||||||||
Sbjct 817684 CGAGCGTTTCAGCGGAGAGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGAT 817743
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || |||||||| || || || || || || |||||||
Sbjct 817744 CATGATGGAGAACATCCACTCCGAGACCTACTCTCTACTCATTGATACTTATATCAAGGA 817803
Query 1456068 CCCGGTCGAGAA--GGACC-ACCTCTTTCGCGCCATCGACAC 1456106
|| | || | | ||| |||||||| ||||| |||||
Sbjct 817804 GCC---CAAGCAGCGCACCTACCTCTTTGATGCCATTGACAC 817842
Score = 136 bits (150), Expect = 6e-26
Identities = 191/260 (73%), Gaps = 6/260 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGC 1456581
||||| ||||||||||| | |||||| | ||||| ||| || | || || |||||
Sbjct 818173 ATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGC 818232
Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641
|| | ||||||||||||| |||||||||||||||||| || ||| ||||| |||||
Sbjct 818233 -CTGCTTGGCATGAACGCCAA-GCTCATGTGCCAGTACATCGAGTTT-GTCGCTGACCGT 818289
Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701
|| |||| ||| || ||| | ||||| ||||| | |||||||| ||| | ||
Sbjct 818290 CTCCTCGTGGCCCTTGGCAACA-AGAAGTACTACAACTCTGCCAACCCCTTCGACTTCAT 818348
Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGC 1456760
||||| ||||| || | |||||||||||||| |||||| || || || || ||
Sbjct 818349 GGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCA 818408
Query 1456761 CAAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 818409 GAAGGCTGGTGTCATGGCCA 818428
Score = 100 bits (110), Expect = 4e-15
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 165748 TGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACC 165807
|||| |||||| || ||| |||||| |||| || || || |||||| |||| ||||||
Sbjct 1532375 TGGCGGACCTGATCTCGTTGGGCGCGATCGGCGCCCGTACAACCGAGTCCCAGCTGCACC 1532316
Query 165808 GCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCG 165867
||||| |||| |||| ||| | | ||||| |||| ||| ||| |||| || |||| |
Sbjct 1532315 GCGAGCTGGCCTCGGGTCTGTCTTTCCCCATCGGCTACAAGAACGGCACAGATGGCAACC 1532256
Query 165868 TGGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTTTCTC 165920
|| | |||| |||| ||| | || | ||| | || || ||| ||| |||
Sbjct 1532255 TGACCGTGGCCGTCGACGCCATTGGCGCCGCCTCGCACCCGCACCGCTTCCTC 1532203
Score = 87.8 bits (96), Expect = 3e-11
Identities = 137/191 (72%), Gaps = 10/191 (5%)
Strand=Plus/Plus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||| ||||| || |||||||| || ||| ||||| ||| ||
Sbjct 817912 AAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAG----TCGAC-CTTCGCTT 817966
Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
||| || || | ||| || || |||||||| ||||| ||||| || ||| | |||
Sbjct 817967 CGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCA 818026
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298
|||| |||||||||||||| || || |||||||||| || ||| ||||||| | ||
Sbjct 818027 TCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTC-TCACCTTCTCCAACGAACTCATT 818085
Query 1456299 AGTCGCGACGA 1456309
||| |||||
Sbjct 818086 TCTCGTGACGA 818096
>seq56
Length=3289960
Score = 86.0 bits (94), Expect = 9e-11
Identities = 107/143 (75%), Gaps = 4/143 (3%)
Strand=Plus/Plus
Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151
|| |||||| |||||| | | |||||| | ||||| || | |||| |||| | ||||
Sbjct 1940457 AGCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTGTACA 1940516
Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAA 262209
|||| || |||| || ||||||||| |||||||||| || | || ||| ||||
Sbjct 1940517 AGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCG-CAGCT-CCAA 1940574
Query 262210 CCTGTGCACCGAGATCGTCCAGT 262232
||||||||| |||||| || |||
Sbjct 1940575 CCTGTGCACTGAGATCATCGAGT 1940597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177804930630530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |