Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq61 143 4e-28 seq56 86.0 9e-11 >seq61 Length=2613024 Score = 143 bits (158), Expect = 4e-28 Identities = 242/342 (71%), Gaps = 19/342 (6%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||||||||| || |||||||| |||||| | || | Sbjct 817510 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCTGAGGAGATTGATC 817568 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| ||| | | ||| || ||||| | ||| Sbjct 817569 TATCCAAGGATCTCCACG----ACTGGCACAACCGCCTCAACGATGATGAGCGTTACTTC 817624 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| ||||| || ||| ||| ||| || ||||| ||| ||||||| Sbjct 817625 ATCTCCCACGTCCTTGCCTTCTT-CGCTGCCTCCGACGGTATCGTCAACGAAAACCTGGT 817683 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 817684 CGAGCGTTTCAGCGGAGAGGTCCAGATTCCCGAGGCTCGTTGCTTCTACGGTTTCCAGAT 817743 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| || || || || || || ||||||| Sbjct 817744 CATGATGGAGAACATCCACTCCGAGACCTACTCTCTACTCATTGATACTTATATCAAGGA 817803 Query 1456068 CCCGGTCGAGAA--GGACC-ACCTCTTTCGCGCCATCGACAC 1456106 || | || | | ||| |||||||| ||||| ||||| Sbjct 817804 GCC---CAAGCAGCGCACCTACCTCTTTGATGCCATTGACAC 817842 Score = 136 bits (150), Expect = 6e-26 Identities = 191/260 (73%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCG-GTGGC 1456581 ||||| ||||||||||| | |||||| | ||||| ||| || | || || ||||| Sbjct 818173 ATCATTGTCGAGGCCGTTGGTATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGTGGC 818232 Query 1456582 GCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGC 1456641 || | ||||||||||||| |||||||||||||||||| || ||| ||||| ||||| Sbjct 818233 -CTGCTTGGCATGAACGCCAA-GCTCATGTGCCAGTACATCGAGTTT-GTCGCTGACCGT 818289 Query 1456642 CTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGAT 1456701 || |||| ||| || ||| | ||||| ||||| | |||||||| ||| | || Sbjct 818290 CTCCTCGTGGCCCTTGGCAACA-AGAAGTACTACAACTCTGCCAACCCCTTCGACTTCAT 818348 Query 1456702 GGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGC 1456760 ||||| ||||| || | |||||||||||||| |||||| || || || || || Sbjct 818349 GGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTATCA 818408 Query 1456761 CAAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 818409 GAAGGCTGGTGTCATGGCCA 818428 Score = 100 bits (110), Expect = 4e-15 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 165748 TGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACC 165807 |||| |||||| || ||| |||||| |||| || || || |||||| |||| |||||| Sbjct 1532375 TGGCGGACCTGATCTCGTTGGGCGCGATCGGCGCCCGTACAACCGAGTCCCAGCTGCACC 1532316 Query 165808 GCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCG 165867 ||||| |||| |||| ||| | | ||||| |||| ||| ||| |||| || |||| | Sbjct 1532315 GCGAGCTGGCCTCGGGTCTGTCTTTCCCCATCGGCTACAAGAACGGCACAGATGGCAACC 1532256 Query 165868 TGGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTTTCTC 165920 || | |||| |||| ||| | || | ||| | || || ||| ||| ||| Sbjct 1532255 TGACCGTGGCCGTCGACGCCATTGGCGCCGCCTCGCACCCGCACCGCTTCCTC 1532203 Score = 87.8 bits (96), Expect = 3e-11 Identities = 137/191 (72%), Gaps = 10/191 (5%) Strand=Plus/Plus Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCAA---CAAGGAGGGCCTCGACACTTTGCCG 1456179 || |||||||| ||||| || |||||||| || ||| ||||| ||| || Sbjct 817912 AAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAG----TCGAC-CTTCGCTT 817966 Query 1456180 AGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238 ||| || || | ||| || || |||||||| ||||| ||||| || ||| | ||| Sbjct 817967 CGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTGGTTCCTTCGCCTCCA 818026 Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298 |||| |||||||||||||| || || |||||||||| || ||| ||||||| | || Sbjct 818027 TCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTC-TCACCTTCTCCAACGAACTCATT 818085 Query 1456299 AGTCGCGACGA 1456309 ||| ||||| Sbjct 818086 TCTCGTGACGA 818096 >seq56 Length=3289960 Score = 86.0 bits (94), Expect = 9e-11 Identities = 107/143 (75%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151 || |||||| |||||| | | |||||| | ||||| || | |||| |||| | |||| Sbjct 1940457 AGCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTGTACA 1940516 Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAA 262209 |||| || |||| || ||||||||| |||||||||| || | || ||| |||| Sbjct 1940517 AGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGGAACTATTCG-CAGCT-CCAA 1940574 Query 262210 CCTGTGCACCGAGATCGTCCAGT 262232 ||||||||| |||||| || ||| Sbjct 1940575 CCTGTGCACTGAGATCATCGAGT 1940597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177804930630530