Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq56 145 1e-29
seq61 102 1e-16
>seq56
Length=3289960
Score = 145 bits (160), Expect = 1e-29
Identities = 679/1067 (64%), Gaps = 16/1067 (1%)
Strand=Plus/Minus
Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411
||||| ||||| || | ||| || ||||| ||||| || || |||||||| || || ||
Sbjct 1940562 ATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAG 1940503
Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471
|| ||||||| ||| |||| | || | ||| | | ||| | | ||| || ||
Sbjct 1940502 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAAT- 1940444
Query 69472 ACGGTCTTGTA---ACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCAT 69526
||||||| ||| ||| || || || || | ||| | |||| ||||| ||||
Sbjct 1940443 --GGTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCC--TCGAACTCAT 1940388
Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586
| || | |||||| | | |||| || || || || | | | ||| || | |
Sbjct 1940387 CACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGT 1940328
Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646
| ||| ||| || ||||| || ||||| ||| |||| ||||| |||||||| | ||
Sbjct 1940327 TAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGG 1940268
Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706
| | |||||| || || || || |||||||| ||||| | | ||| | |
Sbjct 1940267 CACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGT 1940208
Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766
|||| || || || || || || | | || || || || || || ||||| || | ||
Sbjct 1940207 GCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTTACCACCCTGGTCAACGT 1940148
Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826
| | |||||||||||| | || | ||||| |||| ||||||||| || ||||| |
Sbjct 1940147 AGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGAGGAGCCATTGG 1940088
Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886
||||| ||| || || | || || || || | | ||| || || || |
Sbjct 1940087 TTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATTCAAACCAATGCCACCAG 1940028
Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946
| | || || || | |||||| || | ||||| || |||||||| ||||| ||
Sbjct 1940027 CGGTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATACCCTCAATGCTGTCTG 1939968
Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006
| ||||| | || || || || | || | || ||| | || || || |
Sbjct 1939967 CGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGA 1939908
Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066
|| || || ||||| ||||| | |||| || | || | ||| || ||||| ||
Sbjct 1939907 GAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGTGGTAGGTCTCAATGGCCT 1939848
Query 70067 ATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125
|| || ||| | | | || || || | || || ||||||| || ||||| || ||
Sbjct 1939847 TCTCGATGTCCTCGCCG-TGGATACCGACAGCAACGCGCATCAGCAGGTGCTGGGGACGC 1939789
Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185
|| | | || || | || ||||| ||||| || || || || ||
Sbjct 1939788 TCGGCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCAGGGTCTTGAAACCGAAG 1939729
Query 70186 TAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTG 70245
||||||| ||||| | ||||| | ||| | || || || | ||| | |||
Sbjct 1939728 AAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTTAAGCTCATCGGCGTGTTTC 1939669
Query 70246 GTAACTATATCCATA--ACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGAT 70303
|||| || | |||| | || | ||||| || |||| | ||| ||||| || |
Sbjct 1939668 ATAACAATCT-CATAGTGCTGT-TGAGAGATCATAGGAGCAGGCTTATTGTTTTTGGGGT 1939611
Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363
||||||||| | | | || || || ||| | |||||||| | |||||| |
Sbjct 1939610 TAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATTGCTTTTTTGTCTGCTTGTGGA 1939551
Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410
|| || | ||| || | ||| || || || || ||||| || |||
Sbjct 1939550 GGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGTCCGGGTGT 1939504
>seq61
Length=2613024
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676
|| ||||| ||| || || ||||| || | | ||| | |||||| || || |||||
Sbjct 818120 CAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGA 818061
Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736
|| ||||| ||||||||||| |||||||| || |||| || || || ||||| ||||||
Sbjct 818060 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAG 818001
Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765
|| || || || || || || ||||| ||
Sbjct 818000 ATACCCTCGACAGCAGCGAAGGCAACCAG 817972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908241886600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |