Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq56 145 1e-29 seq61 102 1e-16 >seq56 Length=3289960 Score = 145 bits (160), Expect = 1e-29 Identities = 679/1067 (64%), Gaps = 16/1067 (1%) Strand=Plus/Minus Query 69352 ATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAAC 69411 ||||| ||||| || | ||| || ||||| ||||| || || |||||||| || || || Sbjct 1940562 ATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTACAGCATGAAG 1940503 Query 69412 GGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATT 69471 || ||||||| ||| |||| | || | ||| | | ||| | | ||| || || Sbjct 1940502 GGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCATACCAGAGCTTCTGAGCCTTAAT- 1940444 Query 69472 ACGGTCTTGTA---ACGCTTCTCTTTTTCATA-TTGT-GTATATAGCCGTTCGAATTCAT 69526 ||||||| ||| ||| || || || || | ||| | |||| ||||| |||| Sbjct 1940443 --GGTCTTGCGGCCACGGCCCTCCTTCTCGTACTTCTCGTAGAGAGCC--TCGAACTCAT 1940388 Query 69527 CTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCAT 69586 | || | |||||| | | |||| || || || || | | | ||| || | | Sbjct 1940387 CACCGTAGACATCAGCGAGACCAGAGGCCTCGTTGGGGCAGAAGAGAGTCCAGTCACCGT 1940328 Query 69587 CATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGG 69646 | ||| ||| || ||||| || ||||| ||| |||| ||||| |||||||| | || Sbjct 1940327 TAGCCTCAACACGCTTCATGAACAGATCAGGAGTCCAGAGAGCGTAGAAGAGATCCCGGG 1940268 Query 69647 TTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAAT 69706 | | |||||| || || || || |||||||| ||||| | | ||| | | Sbjct 1940267 CACGAACTTCTTCCTTACCGTGGTTCTTACGGAGATCGAGGAACTCGAAGACATCTGCGT 1940208 Query 69707 GCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGT 69766 |||| || || || || || || | | || || || || || || ||||| || | || Sbjct 1940207 GCCAGGGCTCCAGGTAGATGGCAAACGCACCAGGGCGCTTGTTACCACCCTGGTCAACGT 1940148 Query 69767 ATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTG 69826 | | |||||||||||| | || | ||||| |||| ||||||||| || ||||| | Sbjct 1940147 AGCGGGCAGTGTTATTGAACACACGGAGCATAGGAACAATACCATTGGAGGAGCCATTGG 1940088 Query 69827 TTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTG 69886 ||||| ||| || || | || || || || | | ||| || || || | Sbjct 1940087 TTCCACCAATGTAGGAACCGGTGGCACGGATGCGGTGAACATTCAAACCAATGCCACCAG 1940028 Query 69887 CCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCAT 69946 | | || || || | |||||| || | ||||| || |||||||| ||||| || Sbjct 1940027 CGGTCTTGGAAATCATAGCACAGGTCTTAAGAGTGTCGTAGATACCCTCAATGCTGTCTG 1939968 Query 69947 CTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATA 70006 | ||||| | || || || || | || | || ||| | || || || | Sbjct 1939967 CGGACATGTCGACCAGGAAGCAAGAAGCAAGCTGGGGCTGGGGAGTGGCGGCGTTGAAGA 1939908 Query 70007 ATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTG 70066 || || || ||||| ||||| | |||| || | || | ||| || ||||| || Sbjct 1939907 GAGTGGGGGAGGCGTGGGTGAAGTACTTTTGGGACATCAAGTGGTAGGTCTCAATGGCCT 1939848 Query 70067 ATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGT 70125 || || ||| | | | || || || | || || ||||||| || ||||| || || Sbjct 1939847 TCTCGATGTCCTCGCCG-TGGATACCGACAGCAACGCGCATCAGCAGGTGCTGGGGACGC 1939789 Query 70126 TCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAA 70185 || | | || || | || ||||| ||||| || || || || || Sbjct 1939788 TCGGCAACACTGCCGTTGATACGGAGAAGATATGAACGCTCCAGGGTCTTGAAACCGAAG 1939729 Query 70186 TAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTG 70245 ||||||| ||||| | ||||| | ||| | || || || | ||| | ||| Sbjct 1939728 AAGTTGTAGTTGAAGTCGCGGTCGTAGACAATGGCCGAGTTAAGCTCATCGGCGTGTTTC 1939669 Query 70246 GTAACTATATCCATA--ACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGAT 70303 |||| || | |||| | || | ||||| || |||| | ||| ||||| || | Sbjct 1939668 ATAACAATCT-CATAGTGCTGT-TGAGAGATCATAGGAGCAGGCTTATTGTTTTTGGGGT 1939611 Query 70304 TAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTA 70363 ||||||||| | | | || || || ||| | |||||||| | |||||| | Sbjct 1939610 TAACATAGTGGTAGAGGTCAGAGATGACCATGGAGAATTGCTTTTTTGTCTGCTTGTGGA 1939551 Query 70364 AATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGT 70410 || || | ||| || | ||| || || || || ||||| || ||| Sbjct 1939550 GGTTGGAAACGGCAATACGGGCAGCCAGGATGGCGTAGTCCGGGTGT 1939504 >seq61 Length=2613024 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 39617 CAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGT 39676 || ||||| ||| || || ||||| || | | ||| | |||||| || || ||||| Sbjct 818120 CAAGCGAAATCAGTGTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGA 818061 Query 39677 CCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAG 39736 || ||||| ||||||||||| |||||||| || |||| || || || ||||| |||||| Sbjct 818060 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAG 818001 Query 39737 ATGCCTTCTACTGCTGCAAATGCAACAAG 39765 || || || || || || || ||||| || Sbjct 818000 ATACCCTCGACAGCAGCGAAGGCAACCAG 817972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908241886600