Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2 109 5e-19 >seq2 Length=3819764 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| || | ||||| || | ||| || || || ||||||||||| Sbjct 1934848 CCACCACGCAGACGGAGCACCAAGTGCAGGGTACTCTCCTTCTGGATATTGTAGTCAGAA 1934789 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | ||||| |||| || ||||| ||||||||| | || |||||||| || || || || Sbjct 1934788 AGGGTGCGCCCGTCCTCCAGCTGCTTACCGGCGAAGATAAGACGCTGCTGGTCTGGGGGG 1934729 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||||||| | || | | | || | ||||| | | ||| ||| Sbjct 1934728 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATCGTGTCAGATGATTCCACT 1934669 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | ||||| || || || || ||||| ||||||||| Sbjct 1934668 TCCAGCGTGATGGTCTTGCCAGTGAGTGTCTTGACAAAAATTTGCATA 1934621 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | |||| | || || ||||| || ||| Sbjct 1934362 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCATCCTCAAGCTGCTTTCCG 1934303 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | |||||| ||||| |||||| || Sbjct 1934302 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATACCCTCCTTATCCTGAATCTTGGACTTG 1934243 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | |||||||| ||||| || | || || || || || Sbjct 1934242 ACGTTGTCGATGGTGTCGGAAGACTCAACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTC 1934183 Query 27231 TTCACAAAGATTTGCATA 27248 || || |||||||||||| Sbjct 1934182 TTTACGAAGATTTGCATA 1934165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424934063372280