Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03- 04] 65 sequences; 34,374,118 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq56 239 6e-58 seq61 107 2e-18 seq55 104 3e-17 >seq56 Length=3289960 Score = 239 bits (264), Expect = 6e-58 Identities = 576/865 (67%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 |||||||| | || ||||| ||||||||||| |||||| | | ||||||| | Sbjct 1940649 GGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATG 1940590 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| || ||| || |||| ||||| ||||| ||||||||| Sbjct 1940589 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTG 1940530 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| ||||||||||| |||||| |||| | || ||||| ||||| | | ||||| Sbjct 1940529 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 1940470 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || ||||| || |||| || |||||| |||||| Sbjct 1940469 GCATACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTA 1940414 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| |||||| || || ||||| ||||| | || | |||||| | |||| || Sbjct 1940413 CTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTT 1940354 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| |||| ||| | ||| ||||||| ||||||||||| || || ||| | Sbjct 1940353 GGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGT 1940294 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||| || | | |||||||| | ||| | ||||| | ||| ||||| || | Sbjct 1940293 CCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAG 1940234 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || |||||||| | || ||| |||||||| ||||| || |||| || | || Sbjct 1940233 ATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGG 1940174 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| | ||| | || | || ||||| || ||| || || || || ||||| Sbjct 1940173 GCGCTTGTTA---CCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCAT 1940117 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 |||| |||||||| || ||||| || || | ||| || |||| | | Sbjct 1940116 AGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGAT 1940057 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 || | | || ||||| || ||||| ||| || || ||||| | |||| Sbjct 1940056 GCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAG 1939997 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| | |||||||| | || ||| | || ||| ||||||||| | | Sbjct 1939996 AGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAG 1939937 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTT 111998 ||| || || || | || |||||||| || || | ||||| |||| ||| || Sbjct 1939936 CTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTTTT 1939878 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||||| || ||| ||||| | | | || ||||| || |||||||| |||| | Sbjct 1939877 GGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAG 1939818 Query 112059 CGACCCGCATGAACATGTACTGTGG 112083 | || ||||| | || || ||| || Sbjct 1939817 CAACGCGCATCAGCAGGTGCTGGGG 1939793 >seq61 Length=2613024 Score = 107 bits (118), Expect = 2e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||||||||| || || ||||| ||||| || |||||| ||||| ||||| ||||| Sbjct 818106 GTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 818047 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||| | ||| | || | | ||| || || ||||||||||||||||| ||| Sbjct 818046 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAGC 817987 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTG 122848 || || |||| || || ||||||| ||| | || ||| | ||| || | Sbjct 817986 AGCGAAGGCAACCAGACGCGAAGCGAAGG-TCGACTCAGTGTCATTGATCCAACGGATGG 817928 Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTAC 122879 |||| | |||||||| ||||||| || || Sbjct 817927 CCCACTCGGCCTTCTTGGCAATACAGGGAAC 817897 >seq55 Length=3282825 Score = 104 bits (114), Expect = 3e-17 Identities = 219/324 (68%), Gaps = 17/324 (5%) Strand=Plus/Minus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 ||||||||||| || ||||| | || || | || ||| | |||||||||| | Sbjct 513275 AAGCCATCCATTTCAGTGAGAATCTGGTTCAGAGTGCTTTCACGCTCATCATTTCCG--- 513219 Query 11600 ATACCACCAGCACT-GCGTTG--------CTTGCCCACCGCATCAATCTCATCAATGAAG 11650 |||||| || | | ||| ||| || | ||||| || |||||||||||| Sbjct 513218 ---CCACCAACATTTGACTTGGCTCGGGACTTTCCAATGGCATCGATTTCATCAATGAAG 513162 Query 11651 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCC 11710 | ||| || || || | ||| ||| | | |||||||| || || | || ||| Sbjct 513161 ATAATGCAGGGAGTGTTCTTGCGCGCGTTGGCGAAGAGATCACGGACACGAGAGGGACCG 513102 Query 11711 ACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CACTGGATGAATGGGACATTTGA 11769 ||||| || |||||||| || || | | || | ||||| | ||| || || || Sbjct 513101 ACACCGACGAACATCTCAACGAACTCGGAACCACTGACACTGTA-GAAGGGCACGCCAGA 513043 Query 11770 TTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAG 11829 |||||| || |||| ||| || |||||||| || ||||| || ||| | ||||| Sbjct 513042 TTCACCGGCAGTGGCCTTGGCAAGCAGGGTCTTACCAGTACCGGGAGGACCAGAGAGAAT 512983 Query 11830 GGCGCCTCGGGGGATCTTGGCACC 11853 || || ||||||||||||||||| Sbjct 512982 AGCACCGCGGGGGATCTTGGCACC 512959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031489724000