Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq56 239 6e-58
seq61 107 2e-18
seq55 104 3e-17
>seq56
Length=3289960
Score = 239 bits (264), Expect = 6e-58
Identities = 576/865 (67%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289
|||||||| | || ||||| ||||||||||| |||||| | | ||||||| |
Sbjct 1940649 GGAAGGGCAAGAGAAGCCAAGTTGCAAACAGCGACCTCATCAGGAGCACTGTACTCGATG 1940590
Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349
|| || || || | |||||| || ||| || |||| ||||| ||||| |||||||||
Sbjct 1940589 ATCTCAGTGCACAGGTTGGAGCTGCGAATAGTTCCCAGGTTCTTCTGGTTGCTCTTCTTG 1940530
Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409
||||| ||||||||||| |||||| |||| | || ||||| ||||| | | |||||
Sbjct 1940529 TTGCAAGCATCCTTGTACAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATG 1940470
Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465
|| | ||| | | || | | || ||||| || |||| || |||||| ||||||
Sbjct 1940469 GCATACCAGAGCTTCTGAGCCT----TAATGGTCTTGCGGCCACGGCCCTCCTTCTCGTA 1940414
Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525
||| |||||| || || ||||| ||||| | || | |||||| | |||| ||
Sbjct 1940413 CTTCTCGTAGAGAGCCTCGAACTCATCACCGTAGACATCAGCGAGACCAGAGGCCTCGTT 1940354
Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585
|| ||||| |||| ||| | ||| ||||||| ||||||||||| || || ||| |
Sbjct 1940353 GGGGCAGAAGAGAGTCCAGTCACCGTTAGCCTCAACACGCTTCATGAACAGATCAGGAGT 1940294
Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645
||| || | | |||||||| | ||| | ||||| | ||| ||||| || |
Sbjct 1940293 CCAGAGAGCGTAGAAGAGATCCCGGGCACGAACTTCTTCCTTACCGTGGTTCTTACGGAG 1940234
Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699
|| |||||||| | || ||| |||||||| ||||| || |||| || | ||
Sbjct 1940233 ATCGAGGAACTCGAAGACATCTGCGTGCCAGGGCTCCAGGTAGATGGCAAACGCACCAGG 1940174
Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759
| ||| | ||| | || | || ||||| || ||| || || || || |||||
Sbjct 1940173 GCGCTTGTTA---CCACCCTGGTCAACGTAGCGGGCAGTGTTATTGAACACACGGAGCAT 1940117
Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819
|||| |||||||| || ||||| || || | ||| || |||| | |
Sbjct 1940116 AGGAACAATACCATTGGAGGAGCCATTGGTTCCACCAATGTAGGAACCGGTGGCACGGAT 1940057
Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879
|| | | || ||||| || ||||| ||| || || ||||| | ||||
Sbjct 1940056 GCGGTGAACATTCAAACCAATGCCACCAGCGGTCTTGGAAATCATAGCACAGGTCTTAAG 1939997
Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939
||| | |||||||| | || ||| | || ||| ||||||||| | |
Sbjct 1939996 AGTGTCGTAGATACCCTCAATGCTGTCTGCGGACATGTCGACCAGGAAGCAAGAAGCAAG 1939937
Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATAC-CTT 111998
||| || || || | || |||||||| || || | ||||| |||| ||| ||
Sbjct 1939936 CTGGGGCTGGGGAGTGGCGGCGTTGAAGAGAGTGGGGGAGGCGTGGGTGAA-GTACTTTT 1939878
Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058
|||||||| || ||| ||||| | | | || ||||| || |||||||| |||| |
Sbjct 1939877 GGGACATCAAGTGGTAGGTCTCAATGGCCTTCTCGATGTCCTCGCCGTGGATACCGACAG 1939818
Query 112059 CGACCCGCATGAACATGTACTGTGG 112083
| || ||||| | || || ||| ||
Sbjct 1939817 CAACGCGCATCAGCAGGTGCTGGGG 1939793
>seq61
Length=2613024
Score = 107 bits (118), Expect = 2e-18
Identities = 152/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
|||||||||||| || || ||||| ||||| || |||||| ||||| ||||| |||||
Sbjct 818106 GTGGAGACCCTCGTCACGAGAAATGAGTTCGTTGGAGAAGGTGAGACCGGGCATCAGACC 818047
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||| | ||| | || | | ||| || || ||||||||||||||||| |||
Sbjct 818046 ACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAACCAGAGAAGAAGATACCCTCGACAGC 817987
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTG 122848
|| || |||| || || ||||||| ||| | || ||| | ||| || |
Sbjct 817986 AGCGAAGGCAACCAGACGCGAAGCGAAGG-TCGACTCAGTGTCATTGATCCAACGGATGG 817928
Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTAC 122879
|||| | |||||||| ||||||| || ||
Sbjct 817927 CCCACTCGGCCTTCTTGGCAATACAGGGAAC 817897
>seq55
Length=3282825
Score = 104 bits (114), Expect = 3e-17
Identities = 219/324 (68%), Gaps = 17/324 (5%)
Strand=Plus/Minus
Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599
||||||||||| || ||||| | || || | || ||| | |||||||||| |
Sbjct 513275 AAGCCATCCATTTCAGTGAGAATCTGGTTCAGAGTGCTTTCACGCTCATCATTTCCG--- 513219
Query 11600 ATACCACCAGCACT-GCGTTG--------CTTGCCCACCGCATCAATCTCATCAATGAAG 11650
|||||| || | | ||| ||| || | ||||| || ||||||||||||
Sbjct 513218 ---CCACCAACATTTGACTTGGCTCGGGACTTTCCAATGGCATCGATTTCATCAATGAAG 513162
Query 11651 ACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCC 11710
| ||| || || || | ||| ||| | | |||||||| || || | || |||
Sbjct 513161 ATAATGCAGGGAGTGTTCTTGCGCGCGTTGGCGAAGAGATCACGGACACGAGAGGGACCG 513102
Query 11711 ACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CACTGGATGAATGGGACATTTGA 11769
||||| || |||||||| || || | | || | ||||| | ||| || || ||
Sbjct 513101 ACACCGACGAACATCTCAACGAACTCGGAACCACTGACACTGTA-GAAGGGCACGCCAGA 513043
Query 11770 TTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAG 11829
|||||| || |||| ||| || |||||||| || ||||| || ||| | |||||
Sbjct 513042 TTCACCGGCAGTGGCCTTGGCAAGCAGGGTCTTACCAGTACCGGGAGGACCAGAGAGAAT 512983
Query 11830 GGCGCCTCGGGGGATCTTGGCACC 11853
|| || |||||||||||||||||
Sbjct 512982 AGCACCGCGGGGGATCTTGGCACC 512959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031489724000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |