Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20capsulatum_20[genbank_20GCA_5F000943765.1_202015-03-
04] 65 sequences; 34,374,118 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq56 194 2e-44
seq61 150 2e-31
seq55 105 8e-18
>seq56
Length=3289960
Score = 194 bits (214), Expect = 2e-44
Identities = 510/770 (66%), Gaps = 15/770 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| || || | |||||||| || ||||||| || || || ||||| || | |
Sbjct 1939793 CCCCAGCACCTGCTGATGCGCGTTGCTGTCGGTATCCACGGCGAGGACATCGAGAAGGCC 1939852
Query 104282 TTGGAGACATACGACAAGATGTCCCAAG-GTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || |||||||||| ||| |||| ||||| | || || |||||
Sbjct 1939853 ATTGAGACCTACCACTTGATGTCCCAAAAGTAC-TTCACCCACGCCTCCCCCACTCTCTT 1939911
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| || | || || ||||| | | ||||||||| ||| || | ||
Sbjct 1939912 CAACGCCGCCACTCCCCAGCCCCAGCTTGCTTCTTGCTTCCTGGTCGACATGTCCGCAGA 1939971
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | |||||||| | ||||||| | ||||| || || ||| |||||
Sbjct 1939972 CAGCATTGAGGGTATCTACGACACTCTTAAGACCTGTGCTATGATTTCCAAGACCGCTGG 1940031
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|| ||||| || | | || | | |||| || ||| | || || ||
Sbjct 1940032 TGGCATTGGTTTGAATGTTCACCGCATCCGTGCCACCGGTTCCTACATTGGTGGAACCAA 1940091
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| || |||||||| |||| ||||| || || || || ||| || ||||| ||
Sbjct 1940092 TGGCTCCTCCAATGGTATTGTTCCTATGCTCCGTGTGTTCAATAACACTGCCCGCTACGT 1940151
Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGGCA 104634
| || | ||| | ||| | || | || |||| || ||||| |||||
Sbjct 1940152 TGACCAGGGTGG---TAACAAGCGCCCTGGTGCGTTTGCCATCTACCTGGAGCCCTGGCA 1940208
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
||| ||| || | |||||||| || | ||| ||||| ||| | || || | ||
Sbjct 1940209 CGCAGATGTCTTCGAGTTCCTCGATCTCCGTAAGAACCACGGTAAGGAAGAAGTTCGTGC 1940268
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
||| |||||||||| ||||||||||| ||| ||||| ||||||||| | ||||||| |
Sbjct 1940269 CCGGGATCTCTTCTACGCTCTCTGGACTCCTGATCTGTTCATGAAGCGTGTTGAGGCTAA 1940328
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
|| | ||| ||||||| || || || |||| |||||||| | |||| | |||||
Sbjct 1940329 CGGTGACTGGACTCTCTTCTGCCCCAACGAGGCCTCTGGTCTCGCTGATGTCTACGGTGA 1940388
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCG-GGCGACTGCGACGGTGC 104873
||||| || || || ||| ||||||||| | || || || ||| | ||| |
Sbjct 1940389 TGAGTTCGAGGCTCTCTACGAGAAGTACGAGAAGGAGGGCCGTGGCCGC-AAGACCATTA 1940447
Query 104874 CAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932
||| | || | | ||| | || ||||| || | || || |||||||||| || | |
Sbjct 1940448 AGGCT-CAGAAGCTCTGGTATGCCATTCTTGAGGCCCAGACTGAGACTGGTAACCCCTTC 1940506
Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 104982
||||| ||||| || || || ||| | ||||| || || ||||| ||||
Sbjct 1940507 ATGCTGTACAAGGATGCTTGCAACAAGAAGAGCAACCAGAAGAACCTGGG 1940556
>seq61
Length=2613024
Score = 150 bits (166), Expect = 2e-31
Identities = 163/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGT 94789
||||||| |||||| ||||| || || ||||| || ||| | ||| || |||
Sbjct 817895 CAGTTCCCTGTATTGCCAAGAAGGCCGAGTGGGCCATCCGTTGGATCAATGACACTGAGT 817954
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
|| |||| ||| ||| || | || || || ||| |||||||||||||||||||
Sbjct 817955 CGA---CCTTCGCTTCGCGTCTGGTTGCCTTCGCTGCTGTCGAGGGTATCTTCTTCTCTG 818011
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
|||||||| | | || | |||||||||||||| ||||| ||||| |||||| |||||
Sbjct 818012 GTTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGTCTCACCTTCT 818071
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
||||||| || || |||||||||||||| ||||||
Sbjct 818072 CCAACGAACTCATTTCTCGTGACGAGGGTCTCCAC 818106
>seq55
Length=3282825
Score = 105 bits (116), Expect = 8e-18
Identities = 167/236 (71%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753
|||||| | |||||| || ||||||||||||| ||||| || || | ||| |||
Sbjct 513192 CTTTCCAATGGCATCGATTTCATCAATGAAGATAATGCAGGGAGTGTTCTTGCGCGCGTT 513133
Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG- 9812
| |||||||| || ||||| || || ||||| || |||||||| || || | |
Sbjct 513132 GGCGAAGAGATCACGGACACGAGAGGGACCGACACCGACGAACATCTCAACGAACTCGGA 513073
Query 9813 -CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9871
| | | ||| || | |||||| || ||||||||| ||| |||| ||| || ||
Sbjct 513072 ACCACTG-ACACTGTA-GAAGGGCACGCCAGATTCACCGGCAGTGGCCTTGGCAAGCAGG 513015
Query 9872 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927
|||||||| ||||| || ||| | ||| | ||||| || || |||||||| ||
Sbjct 513014 GTCTTACCAGTACCGGGAGGACCAGAGAGAATAGCACCGCGGGGGATCTTGGCACC 512959
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260326100600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |